Sphingomonas sp. KC8: KC8_05685
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Entry
KC8_05685 CDS
T04987
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc00550
Peptidoglycan biosynthesis
spkc01100
Metabolic pathways
spkc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KC8_05685
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KC8_05685
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spkc01011
]
KC8_05685
Enzymes [BR:
spkc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KC8_05685
Peptidoglycan biosynthesis and degradation proteins [BR:
spkc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KC8_05685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ARS26776
UniProt:
A0A1X9YDB3
LinkDB
All DBs
Position
complement(1195271..1197268)
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AA seq
665 aa
AA seq
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MKRTPQIVTEQQQLLTFTRRAMVLGGAQFAVGAVLAGRMAWLSIAQNEHYRLMAEDNRVQ
LILIPPRRGWIVDRYGKPIAINRTDFRVDIIPDQLKAPDRERVLAELTELLALPAEEVER
IRAALQDAAGFRPIPVAEKVQYERFAAVSVRQSELPGVAPARGYTRYYPAGAAVGHLVGY
VGVASAKDYEKSKDPLLIAPGFKIGKEGLEKVEEMVLRGKPGAKRSEVTARGKVVRDLET
RPDVSGGTLRLTVDAGLQAYTARRIGTHSGSVVVVDCHTGGLLCMSSMPSYDPNSFSDGI
SHSEYAMLNANDHLPLLNKTLQGLYPPGSTIKPAVALALLRAGQNPDQTVVCTGAYRLGN
RLFHCHKRGGHGVVDMRRAIHQSCDVFFYHYSQTIGIDAIATMARQLGLGEEFDLPVASQ
RYGTVPDTAWKQRRYKAGWNTYDTVNATIGQGYMLSNPLQLAILSARIASGRSLMPHLLE
GQVARPGEPLDLDPEHLAFIRSAMSDVVNGPGTAGRSRLPIPNVQMAGKTGTAQVRNITA
AERARGGKFGGEGVPWKYRDHGLFIGFAPVDDPRYAISVVIEHGIGGSAVAAPIARDVLT
YLYDPAKALATLETMEKGWGGDIETRMARQAAEWANRDKPVPAPAAASAPVADNAAGVRE
PAERD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcacccctcagatcgttaccgaacagcagcagctcctgactttcacccgtcgg
gccatggtgcttggcggtgcgcagttcgctgtcggcgcggtgctggccgggcggatggcc
tggttatcgatcgcgcagaacgaacattatcgcctgatggcggaagataaccgggtccag
ctgatcctgatcccgccccggcgcggctggatcgtcgaccgctatggcaagccgatcgcg
atcaaccgcacggatttccgcgtcgatatcattcccgatcagttgaaggcgccggatcgc
gaacgtgttctggccgaactcaccgaattgctggcattgcctgccgaggaggtggagcgg
atccgcgctgcgttgcaggatgcggcaggcttccggccgattccggtggccgaaaaggtg
cagtatgaacggtttgcggccgtaagcgtccgccagagcgaactgcccggtgtggcgccg
gcgcgcggctatacccgttattatccggccggtgcggcggttggtcatctggtcggctat
gtcggtgtcgcatcggccaaggattatgagaaatccaaggatccgttgttgattgcgccg
ggtttcaagattggcaaggaaggccttgaaaaagtagaagaaatggtgcttcgcgggaag
cccggcgccaagcgcagcgaagtcaccgcgcgcggcaaggtggtgcgcgatctggaaacg
cggcccgatgtgagcggcgggacgctgcggctaacggtggatgccggcctgcaggcctat
accgcccggcggatcggcacgcacagcggatcggtggtcgtggtcgattgtcacaccggc
ggcctgctgtgcatgtcgtccatgccatcctacgatcccaacagcttttcggacggcatc
agccattccgaatatgcaatgctcaacgcaaacgatcatctgccgctgttgaacaagacg
ttgcagggattgtatccgcccggatcgacgatcaagccggcggtggcgctggcgttgttg
cgggcggggcagaacccggaccagaccgtggtctgcaccggcgcttatcgtctcggcaat
cgtctgttccactgccacaagcgcggcggccacggggtggtcgacatgcgtcgggcgatc
caccagagctgtgacgtcttcttctaccattattcgcagacgatcggcatcgacgcgatc
gccaccatggcgcggcagctgggcctgggggaggagttcgacctgccggtcgcgtcgcag
cgctatggcaccgtgccggataccgcgtggaagcagcgccgctacaaggccggctggaat
acctatgacacggtcaatgccacgatcgggcagggctatatgctgtcgaatccgttgcag
ctggcgatcctgtcggcgcggatcgcatcgggccgttcgctgatgccgcatttgctggaa
gggcaggtggcgaggccgggcgaaccgctggaccttgatcccgaacatctcgccttcatc
cgttcggcgatgagtgacgtggtgaacgggccgggcacggccggccgctcgcgtttgccg
atccccaatgtccagatggcgggcaagacgggcaccgcgcaggtccgcaatatcaccgca
gccgaacgcgcccgtggcggcaaattcggtggcgagggcgttccctggaaatatcgcgac
catggtttgttcatcggcttcgcgccggtggacgatccccgttatgccatttcggtggtg
atcgaacatggcattggcggatccgccgtggcggcgccgattgcgcgtgatgtgctgacc
tatctttacgatccggcaaaggcgctggcgacgctggaaacgatggaaaaaggctggggc
ggggatatcgaaacgcgcatggcccggcaggcggccgagtgggccaatcgggacaagccc
gttccggcccctgcagccgcatcggcgcccgttgctgacaatgccgccggggttcgcgaa
ccggctgagcgcgactga
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