Sphingomonas sp. LK11: AV944_02075
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Entry
AV944_02075 CDS
T04954
Symbol
sucC
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk00020
Citrate cycle (TCA cycle)
splk00640
Propanoate metabolism
splk00660
C5-Branched dibasic acid metabolism
splk01100
Metabolic pathways
splk01110
Biosynthesis of secondary metabolites
splk01120
Microbial metabolism in diverse environments
splk01200
Carbon metabolism
Module
splk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
splk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AV944_02075 (sucC)
00640 Propanoate metabolism
AV944_02075 (sucC)
00660 C5-Branched dibasic acid metabolism
AV944_02075 (sucC)
Enzymes [BR:
splk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
AV944_02075 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-ProteinID:
APX64833
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Position
complement(425845..427044)
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AA seq
399 aa
AA seq
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MNIHEYQAKELLAKFGVPVPAGFAAMTVEEAVEASSKLPGPLYVVKAQIHAGGRGKGKFK
ELGPDAKGGVRLAKTAEEVRAAATDMLGNTLVTIQTGEAGKQVNRLYVTDGVDIAKEFYL
ALLVNRATGRVSMVASTEGGMDIETVAHDTPEKIHSIDIDTATGFMPHHGRAVAAALELT
GDLAKQAANVASKLYAAFLGTDAEQIEINPLAVTEDGKLMVLDAKVGFDGNAMFRHKDLM
ELRDTTEEDAMELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG
GGANKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIADGIVAAAKEVNLQVPLVVRLE
GTNVEKGKEILANSGLAIVPANDLGDAAKKIVAEVQKVA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccacgaatatcaggccaaggaattgctcgccaagttcggcgtgcccgtcccc
gccggcttcgccgcgatgaccgtcgaggaggccgttgaggcatcgtccaagctccccggc
ccgctctacgtcgtcaaggcgcagatccatgcgggcggccgcggcaagggcaagttcaag
gaactcggccccgacgccaagggcggcgtccgcctggccaagaccgccgaggaagtccgc
gctgccgccaccgacatgctgggcaacacgctggtcaccatccagaccggcgaagcgggc
aagcaggtcaaccgcctgtacgtgaccgacggcgtcgacatcgcgaaggaattctacctc
gcgctgctcgtcaaccgtgcgaccggccgtgtctcgatggtcgcctcgaccgaaggcggc
atggacatcgagaccgtggcgcatgacacgcccgagaagatccactcgatcgacatcgac
accgcgaccggcttcatgccgcatcacggccgcgccgtcgccgccgcgctggagctgacc
ggcgacctcgccaagcaggccgccaatgtcgcgtcgaagctctacgccgcgttcctgggc
accgatgccgagcagatcgagatcaacccgctcgccgtcaccgaggacggcaagctgatg
gtgctcgacgccaaggtcggcttcgacggcaacgccatgttccgtcacaaggacctgatg
gaactgcgcgacaccaccgaagaagacgcgatggagctggaggcgtcgaagtacgacctg
gcgtacatcaagctcgacggtgacattggctgcatggtcaacggcgccggcctcgccatg
gcgacgatggacatcatcaagctgaacggcatgttcccggccaacttcctcgacgtcggc
ggcggcgcgaacaaggagaaggtcaccgcggcgttcaagatcatcctgagcgatcccgcc
gtgaagggcatcctggtcaacatcttcggcggcatcatgcgctgcgacatcatcgccgac
ggcatcgtcgcggcggcgaaggaagtgaacctgcaggttccgctggtcgtccgcctcgag
ggtacgaatgtcgagaagggcaaggaaatcctcgccaattcgggtctcgccatcgtcccc
gccaacgatctgggcgatgccgccaagaagatcgtggccgaggttcagaaggtcgcctaa
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