Sphingomonas sp. LK11: AV944_03375
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Entry
AV944_03375 CDS
T04954
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splk03016
]
AV944_03375
Enzymes [BR:
splk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AV944_03375
Transfer RNA biogenesis [BR:
splk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AV944_03375
Prokaryotic type
AV944_03375
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APX65038
LinkDB
All DBs
Position
705176..706177
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AA seq
333 aa
AA seq
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MHGWIILDKPLGLGSTQGVSAVKRCLRQGGYGKGIKVGHGGTLDPLATGVLPIAVGEATK
LAGRMLDSDKVYDFTIRFGEQTSTLDAEGEVVATSDVRPTRAALEAVLPRFTGPISQVPP
AYSALKVDGERAYDLARAGEEVVLASRAVTIHSLHSSPSSLGEGDHRGSDGGGAGRTGDA
PPPRPAGAVPLPEQAQGGLEEVTLTAHVSKGTYIRSLARDIALALGTVGHVTMLRRTKAG
PFTLAPAISLDKLNGMGQARTLEQILLPLRAGLDDIPALALDPDQAGALRQGRVLAGIAV
DDGQYFAMLGDIPVALVEALDEQVRVVRGFNLD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcatggatggatcatactcgacaagccgctggggctgggatcgacgcaaggggtgagc
gcggtcaagcggtgcttgcgccagggcggctatggcaagggcatcaaggtcggtcatggc
ggcacgctcgacccgctggcgacgggcgtgctgccgatcgcggtgggcgaggcgaccaaa
ctcgccgggcggatgctcgacagcgacaaggtgtatgacttcaccatccgtttcggcgag
cagacttcgacgctggacgccgagggtgaggtggtggcgaccagcgacgtgcgcccgacc
cgcgccgcgctggaggcggtgctgccacgtttcaccggtccgattagccaggtgccgccc
gcctattccgcgctgaaggtcgatggcgagcgggcgtacgacctcgcacgcgccggggag
gaggtggtgttggcgagtcgcgcggtgacgattcattcgctccattcctccccaagctcg
cttggggagggggaccatcgcggcagcgatggtggaggggcgggacggaccggcgatgcc
cctccaccacgccctgcgggcgcggtccccctccccgagcaagctcagggaggactggaa
gaagtcacccttaccgcgcacgtctcgaagggcacctatatccgctccctcgcgcgcgac
atcgcgctcgcgctcggcacggtcggccatgtcaccatgctccgccggaccaaggcgggg
ccgttcactttggccccggcgatatcgctggacaaattgaacggaatggggcaggcgcgc
actcttgaacagatactcctgccgctgagggcggggctggacgacatcccggctcttgct
ctcgaccccgaccaggcaggggcgctccgtcaggggcgtgtgctggccgggattgccgtg
gacgatggccaatatttcgcgatgctgggggatatcccggtggcgctggtagaggcgctg
gacgaacaagtccgggtcgttcgtggttttaacctcgattaa
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