Sphingomonas sp. LK11: AV944_13695
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Entry
AV944_13695 CDS
T04954
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
splk03009
]
AV944_13695
Enzymes [BR:
splk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AV944_13695
Ribosome biogenesis [BR:
splk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AV944_13695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
APX66704
LinkDB
All DBs
Position
2979788..2980735
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AA seq
315 aa
AA seq
DB search
MDRGVSIIDARIAPTADGWRLDRALADAVPTLSRERLKVLIASGAVTRDGVMARDPAKRA
AGGDLFQVAVPAPLPAHNEPQDIPLVIAYEDEHLIVLDKPAGLVVHPAAGNFDGTLVNAL
LHHCGGSLSGIGGVARPGIVHRIDKDTSGLMVAAKTDRTHEGLAKQFAAHSIDRRYRAIT
GGIPRPADGTVDAPLARSPQNRKKVAIVQGGKRAVTHYRTIQKLNNAALVECRLETGRTH
QVRVHMQSLGHALLGDPVYGRTKGAQKALLDELDFRRQALHAAHLGFIHPISGNALAFES
PMPPDMQELFSRLHV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaccggggggtttccatcatcgatgcgcggatcgcgcccacagcggacggctggcgg
ttggaccgcgcgctggccgatgcggtgccgactctgtcgcgcgaacggctgaaggtgttg
atcgccagcggcgcggtgacgcgcgacggcgtgatggcccgcgaccccgccaagcgggcg
gcgggcggcgatctgttccaggttgccgtgcccgcccccctgcccgcccataacgagccg
caggatattccgctcgtcatcgcctatgaggacgagcatcttatcgtgctcgacaagccc
gccgggctggtcgtgcatcccgccgctggcaatttcgacgggactttggtcaacgcgctg
ctccatcattgcggcgggtcgctgtcgggcatcggcggcgtcgcgcggccggggatcgtc
caccggatcgacaaggacacgtcgggcctgatggtcgcggcgaagaccgaccgcacgcat
gaggggctggccaagcagttcgcggcgcactcgatcgaccgccgctaccgcgccatcacg
ggcggcatcccgcgccctgccgacggtacggtcgacgcgccgctcgcgcgcagcccgcag
aaccgcaagaaggtggcgatcgtgcagggcggcaagcgggccgtgacgcattaccgcacc
atccaaaagttgaacaacgccgccctggtcgaatgccgtctggagacggggcgcacgcac
caagtgcgcgtgcatatgcaatcgctgggtcacgccttgctgggcgacccggtttatggt
agaacaaagggtgctcaaaaagccctgctcgatgaactcgatttccggcgccaagccctg
cacgcggcgcatctgggctttattcatcccataagcggcaacgctttggcgtttgagagc
cctatgccgcccgacatgcaggaactgttcagtcggcttcacgtatag
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