Sphingomonas sp. LK11: AV944_17120
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Entry
AV944_17120 CDS
T04954
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splk03016
]
AV944_17120
Enzymes [BR:
splk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
AV944_17120
Transfer RNA biogenesis [BR:
splk03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
AV944_17120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
APX67801
LinkDB
All DBs
Position
3708819..3710093
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AA seq
424 aa
AA seq
DB search
MNVYDGERMAELMAAQGLSTTDDASAADLIVLNTCHIRERATERVYSEIGRLRKDAGEQG
RKPMIAVAGCVAQAEGAEIVRRAKVDVVVGPQAYHNLPDLVARAAAGEAALDTDMPVESK
FVHLPGRRKVNPSAFLTVQEGCDKFCTYCVVPYTRGAEVSRSYSAIMDEARSLVDAGARE
ITLLGQNVNAWNDADDRGLHGLIRELDRIPGLHRIRYTTSHPNDMTQGLIDAHRDVESLM
PFLHLPVQSGSDRILKAMNRQHTRDSYMRVMDRVRAARPDIALSGDFIVGFPGETEADFA
DTLSLVDAMGHAQAFSFKYSPRPGTPAATMADQVLPEVMDDRLQRLQAALNRDQHAFNLA
SVGRTCTVLLERRGKLPGQMLGKSPWLQSVHLIGDHQIGDLVEVELVAAGPNSLTGQAKV
KAAA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctatgacggcgagcgcatggccgaattgatggccgcgcaaggcctgtcgacg
accgacgatgccagcgccgccgatctgatcgtcctcaacacctgccacatccgcgagcgc
gcgaccgagcgggtctattcggagatcggccgtctgcggaaggatgcgggcgagcagggc
cgcaagccgatgatcgcggtcgcaggctgcgtcgcccaggccgaaggggcggagatcgtc
cgccgcgccaaggtcgatgtggtggtcggcccgcaggcctatcacaacctgcccgatctg
gtcgccagggcggcggcgggcgaggccgcgctcgacaccgacatgccggtcgagtccaag
ttcgtccacctgcccggccgtcgcaaggtgaacccctcggccttcctgaccgtgcaggaa
ggctgcgacaagttctgcacctattgcgtcgtgccctatacgcgcggtgccgaggtcagc
cgatcctattcggcgatcatggacgaggcgcggtcgctggtcgatgcgggcgcgcgcgag
atcacgctgctgggccagaacgtcaatgcgtggaacgatgccgacgaccgcggcctgcat
ggcctgatccgcgaattggaccggattccggggctgcaccgcatccgctacacgaccagc
catcccaacgacatgacgcaagggctgatcgacgcgcatcgcgacgtcgaaagcctgatg
cccttcctccatctgccggtgcagtcgggcagcgaccgcatcctgaaggcgatgaaccgc
cagcatacgcgcgacagctatatgcgggtgatggaccgcgtgcgcgcggcgcggcccgac
atcgcgctgtcgggggatttcatcgtcggcttccccggcgagaccgaggcggacttcgcg
gacacgctgagcctggtcgacgcgatgggccatgcccaggcgttcagcttcaaatactcg
ccccgccccggcacccccgccgcgacgatggcggatcaggttctgcctgaggtgatggac
gaccgcctccagcgtctccaggccgcgctcaaccgcgaccagcatgcgttcaacctcgcc
agcgtcggacggacctgcaccgtcctgctcgaacggcgcggcaagctacccggccagatg
ctcggcaagtcgccctggctccagtcggtccacctgatcggcgaccaccagatcggcgac
ctggtcgaggtcgaactggtcgccgccggaccgaactcgctgaccggccaggcgaaggta
aaggcggcggcgtaa
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