Streptomyces pluripotens: LK06_012395
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Entry
LK06_012395 CDS
T04845
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
splu
Streptomyces pluripotens
Pathway
splu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK06_012395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splu03021
]
LK06_012395
03400 DNA repair and recombination proteins [BR:
splu03400
]
LK06_012395
Enzymes [BR:
splu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK06_012395
Transcription machinery [BR:
splu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK06_012395
DNA repair and recombination proteins [BR:
splu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK06_012395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ARP70635
UniProt:
A0A221NYK2
LinkDB
All DBs
Position
complement(2802190..2805675)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANMNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSITVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGTDTPLEAGILTVEDIIASIKYLVKLHAGETETAADNGETVVVETDDIDHFG
NRRLRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVIDGQVTDEVDYLTADEEDRFVIAQANAPLTDDLRF
AENRVLVRRRGGEVDYIGPEDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRSAVDAGDVVKAEKDGVVQEVSADYITTANDDGTYITYRLAK
FSRSNQGTSVNQKVIVNEGDRVITGQVLADGPATQNGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVIAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSGLGEEWAQRLQAISADQVAPRTNVATP
VFDGAREDELAGLLEHTIPNRDGDRMVLPSGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaatgcctcgaccgcgaatatgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttcttgcgctc
cagaccgagagctttgactggctgctcggcaacgacgcgtggaaggctcgcgtcgaggag
gctctggagaacggtcaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgacgttccgggaccaccgcttc
gagccgccgaagaactccatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggtgagatcaagtcccagaccgtc
ttcatgggcgacttcccgctcatgacgaacaagggcactttcgtcatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtccgttctcccggtgtctacttcgattcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgtgacatggtcggtgtgcgcatcgaccgcaagcgcaagcag
tcgatcaccgtgctgctgaaggcgctcggttggacgaccgagcagatccttgaggagttc
ggcgaatacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccccccacgcgtgaggccgcg
cagacgctgctggagaacctgtacttcaaccccaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctgggcacggacaccccgctggaggcgggcatcctgacg
gtcgaggacatcatcgcctcgatcaagtacctggtgaagctgcacgccggtgagaccgag
accgccgcggacaacggtgagacggtcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgccgcctgcgcagcgtcggcgagctcatccagaaccaggtccgcacgggcctggcc
cgcatggagcgagtcgtccgcgagcggatgacgacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcggggctcacccacaagcggcgt
ctgtcggcgctcggccccggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacgccggaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgggtcaacgcgttcggtttcgtcgagacc
ccctaccgcaaggtcatcgacggccaggtcaccgacgaggtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctgaccgatgacctgcgtttc
gccgagaaccgcgtcctggtccgccgccgtggcggcgaggtcgactacatcggccccgag
gacgtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttccttgagcacgacgacgccaaccgcgccctcatgggtgccaacatgatgcgtcag
gccgtgccgctgattaagtccgaggcgccgctcgtcggcaccggcatggagtaccgctcc
gcggtcgacgccggcgatgtcgtcaaggccgagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttctcccggtccaaccagggcacctcggtcaaccagaaggtcatcgtcaacgagggcgac
cgcgtcatcaccggccaggtactggccgacggcccggccacccagaacggcgagatggcc
ctcggtaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggcgcc
gaggtcatcgccggcgacatcctcgtcggcaaggtcaccccgaagggggagaccgagctg
acccccgaggagcgcctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgaactgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccggcacggcaacaagggtgtc
atctccaagattctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctgaacccgctgggtgtgccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccggtctgggcgaggagtgggcg
cagcgcctgcaggccatcagcgccgaccaggtcgccccgcgcaccaacgtcgccaccccg
gtgttcgacggtgcccgtgaggacgagctggcgggtctgctggagcacaccatccccaac
cgcgacggcgaccgcatggtcctcccgtccggcaaggcgcggctgttcgacggccggagc
ggcgagccgttcccggacccgatttcggtcggctacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgctcgctcgaccggtccctactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcctacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtcgctctgcctgaacgtg
gaggtgctgtccagcgacggtatgtccatcgagatgcgtgacaccgacgaagatgtcttc
cgcgctgcggaggagctcggtatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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