Serratia inhibens: Q5A_009480
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Entry
Q5A_009480 CDS
T04576
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sply
Serratia inhibens
Pathway
sply03030
DNA replication
sply03430
Mismatch repair
sply03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q5A_009480 (holB)
03430 Mismatch repair
Q5A_009480 (holB)
03440 Homologous recombination
Q5A_009480 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sply03032
]
Q5A_009480 (holB)
03400 DNA repair and recombination proteins [BR:
sply03400
]
Q5A_009480 (holB)
Enzymes [BR:
sply01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q5A_009480 (holB)
DNA replication proteins [BR:
sply03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q5A_009480 (holB)
DNA repair and recombination proteins [BR:
sply03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q5A_009480 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
ANS42358
UniProt:
A0A1B1KPJ2
LinkDB
All DBs
Position
2010060..2011067
Genome browser
AA seq
335 aa
AA seq
DB search
MNWYPWLNTPYRQLVGQYAAGRGHHALLLHASAGNGDEALAYGLSRWLICQRRNGEKSCG
ECHSCRLMLAGNHPDYHVLVPEKGKSSLGIEPIRQVIETLYSHAQQGGAKVIWLPQAELL
TEAAANALLKTLEEPPEKTYFLLSCREPSRLLATLRSRCFYWHLASPDEQLSLQWLNRQT
PGNSVDLLTALRLHDGAPLAAEQLLQPERCQQRSALCAALNAALPQHDMLSLLPVLNHED
VAERLHWLCALLVDAMKWQQGAASFMLNQDQQPLVHQLAGRLSGTSLQQVVQQWLNCRQQ
LLNVTGVNRELLLTERLLSWEQMLGATGYSHPHSL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtacccgtggctgaacacgccttaccgtcagttggtcgggcaatatgcagcc
ggtcgcggccatcatgccctgttgttgcatgcttcagcgggcaatggtgatgaagcgctg
gcttatggtctgagccgctggttgatttgtcagcggcgtaacggcgagaaaagctgcggc
gagtgtcatagctgccggcttatgctggcgggaaaccatccggactatcatgtactggtg
ccggaaaaggggaaaagcagcctgggtatcgagcctatccgccaggtgatcgaaaccctt
tattcccacgcccagcaggggggcgccaaggttatctggttgccgcaggcagagttgctg
accgaagcggcggccaatgccttgttgaaaacgctggaagagccgccggaaaaaacctat
ttcctgttgagttgccgcgagccttcacggctgctggcgacattgcgtagccgctgtttc
tattggcatctcgccagcccggatgaacagctcagtttgcagtggttgaaccggcaaacg
ccgggtaattcggtggatctcctcaccgcactgcggctgcacgacggggcgccgttggcc
gccgagcagctgttgcaacccgagcgttgtcagcagcgcagcgccttgtgcgccgcactg
aatgccgccttgccgcagcatgacatgctgtcgttgttgccggtgctgaatcacgaagac
gtagcggagcggctgcactggctttgcgcattgctggtggatgccatgaagtggcagcag
ggcgcggcgagctttatgcttaatcaggatcagcaaccgttggtgcaccaattggccggc
cgcctgagcggtacctcgctgcagcaagtggtgcagcaatggctcaattgccgccagcag
ttgcttaacgtaaccggcgtcaatcgcgaactgttgctgaccgaacgcttactcagttgg
gagcagatgctcggcgctaccggctattctcatcctcattcgttgtaa
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