Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_00163
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Entry
HMPREF1038_00163 CDS
T02334
Name
(GenBank) putative epimerase/dehydratase WbiI
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Pathway
spng00541
O-Antigen nucleotide sugar biosynthesis
spng00552
Teichoic acid biosynthesis
spng01100
Metabolic pathways
spng01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HMPREF1038_00163
00552 Teichoic acid biosynthesis
HMPREF1038_00163
Enzymes [BR:
spng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
HMPREF1038_00163
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
GFO_IDH_MocA
adh_short
KR
CoA_binding
NAD_binding_10
DXP_reductoisom
PDDEXK_10
DUF3842
Motif
Other DBs
NCBI-ProteinID:
AFS42244
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Position
134454..136304
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AA seq
616 aa
AA seq
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MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTS
LAFLFYQLMVDFWGLSASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIIL
FILLSAFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELEL
VGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNK
LGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGA
GGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLL
QVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVARAVDEAKVPKMVMISTDK
AVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVT
VTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESE
IPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDE
LKQAIIAFANQTTHIE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaactcacagattatgtgattgatctggtggaaattttaaataaacaacaa
aagcaggttttctggggaatatttgatattttcagtatggtggtttccatcattgtatct
tatattttattttatgggctgattaatccagcacctgttgactacattatctatacgagt
ttggccttcctgttctatcaattgatggttgatttttggggcttgagcgcgagtattagt
cgttacagcaagattacggatttcatgaaaatcttttttggtgtgactgctagcagtgtc
ttgtcatatagtatctgttatgccttcttgccactcttctccatccgttttatcattctc
tttatcttgttgagtgccttcttgattttattgccacggattacttggcagttaatctac
tccagacgcaaaaaaggtagtggtgatggagaacaccgtcggaccttcttgattggtgcc
ggtgatggtggggctctctttatggatagttaccaacatccaaccagtgaattagaactg
gtcggtattttggataaggattctaagaaaaagggtcaaaaacttggtggtattcctgtt
ttgggctcttatgacaatctgcctgaattagccaaacgccatcaaatcgagcgtgtcatc
gttgcgattccgtcgctggatccgtcagaatatgagcgtatcttgcagatgtgtaataag
ctgggtgtcaaatgttacaagatgcctaaggttgaaactgttgttcagggccttcaccaa
gcaggtactggcttccaaaaaattgatattacggaccttttgggtcgtcaggaaatccgt
cttgacgaatcgcgtctgggtgcagaactgacaggtaagaccatcttagtcacaggagct
ggaggttcaatcggttctgaaatctgtcgtcaagttagtcgcttcaatcctgaacgcatt
gtcttgctcggtcatggggaaaactcaatctaccttgtttatcatgaattgattcgtaag
ttccaagggattgattatgtacctgtgattgcggacattcaagactatgatcgtttgttg
caagtctttgagcagtacaaacctgctattgtttatcatgcggcagcccacaagcatgtt
cctatgatggagcgcaatccaaaagaagccttcaaaaacaatatccgtggaacttacaat
gttgctagagccgttgatgaagccaaggtgcctaagatggttatgatttcgacagataag
gcagtcaatccaccaaatgttatgggagcaaccaagcgcgtggcggagttgattgtcact
ggctttaaccaacgtagccaatcaacctactgtgcagttcgttttgggaatgttcttggt
agccgtggtagtgtcattccagtctttgaacgtcagattgctgaaggtgggcctgtaacg
gtgacagacttccgcatgacccgttactttatgaccattccagaagctagccgtctggtt
atccatgctggtgcttatgccaaagatggggaagtctttatccttgatatgggcaaacca
gtcaagatttatgacttggccaagaagatggtgcttctaagtggccacactgaaagtgaa
attccaatcgttgaagttggaatccgcccaggtgaaaaactctacgaagaactcttggta
tcaaccgaactcgttgataatcaagttatggataagattttcgttggtaaggttaatgtc
atgcctttagaatccatcaatcaaaagattggagagttccgcactctcagtggagatgag
ttgaagcaagctattatcgcctttgctaatcaaacaacccacattgaataa
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