Schizosaccharomyces pombe (fission yeast): SPBC30B4.07c
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Entry
SPBC30B4.07c CDS
T00076
Symbol
tfb4
Name
(RefSeq) transcription factor TFIIH complex subunit Tfb4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03022
Basal transcription factors
spo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPBC30B4.07c (tfb4)
09124 Replication and repair
03420 Nucleotide excision repair
SPBC30B4.07c (tfb4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spo03021
]
SPBC30B4.07c (tfb4)
03400 DNA repair and recombination proteins [BR:
spo03400
]
SPBC30B4.07c (tfb4)
Transcription machinery [BR:
spo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SPBC30B4.07c (tfb4)
DNA repair and recombination proteins [BR:
spo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SPBC30B4.07c (tfb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
2540343
NCBI-ProteinID:
NP_595532
PomBase:
SPBC30B4.07c
Ensembl:
SPBC30B4.07c
UniProt:
O74366
LinkDB
All DBs
Position
II:complement(1319070..1320617)
Genome browser
AA seq
297 aa
AA seq
DB search
MDEFQTLKQNASWDISEDANDTPSLLVVILDANPASWYSLSKKVPVSKVLADITVFLNAH
LAFHHDNRVAVLASHSDKVEYLYPSIAPEQKVAEVDPTKEANTYRKFREVDDLVLSGMKR
LMSSTDKVSRKTMISGALSRALAYINQVQNKNTLRSRILIFSLTGDVALQYIPTMNCIFC
AQKKNIPINVCNIEGGTLFLEQAADATGGIYLKVDNPKGLLQYLMMSLFPDQNLRKHLNT
PNQANVDFRATCFCHKKVLDIGFVCSVCLSIFCEPRVHCSTCHTKFTVEPMSKKLHT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttcaaactttgaaacaaaatgcctcgtgggatatatctgaagacgcaaat
gatacacccagtttgcttgtagttatattagacgcaaatcctgcctcatggtactccctt
tccaaaaaagtgcctgtttccaaggtactggcagatattacggtttttctaaacgcacac
ttagcttttcatcatgataatagagttgctgtgttagcttcacactcggacaaggttgaa
tacctatacccttcgattgcacctgagcaaaaagtcgcagaagtagatcctaccaaggag
gcaaatacgtatcgaaagtttcgtgaggtagacgacttagttttatctgggatgaagcga
ctcatgagttcgactgataaagtttcaagaaaaacgatgatttccggagcactatctaga
gcccttgcatatatcaatcaagttcaaaataaaaatactcttcgttctcgaattctaatt
ttctcattaactggtgatgttgctcttcagtatattcctactatgaattgtatattttgt
gctcaaaagaaaaatattccaattaacgtttgcaacattgagggaggcaccctgttttta
gaacaagcagcagatgccacaggagggatttacttaaaagttgacaaccccaaaggctta
ctacaatatctcatgatgtcgctttttccggatcaaaatcttcgaaaacacttaaatacc
ccaaaccaagcgaatgttgattttcgagctacatgtttttgccacaaaaaggttttggat
attggctttgtttgctcagtttgtctatcaatattttgtgaaccacgggtgcattgttct
acttgtcataccaaattcacggtagaacctatgtcaaaaaaattgcacacttga
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integrated database retrieval system
