Spongiibacter sp. IMCC21906: IMCC21906_01172
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Entry
IMCC21906_01172 CDS
T03945
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spoi03019
]
IMCC21906_01172
03009 Ribosome biogenesis [BR:
spoi03009
]
IMCC21906_01172
Messenger RNA biogenesis [BR:
spoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IMCC21906_01172
Ribosome biogenesis [BR:
spoi03009
]
Prokaryotic type
rRNA processing factors
IMCC21906_01172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AKH68851
UniProt:
A0A0F7M1E0
LinkDB
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Position
1258769..1260238
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AA seq
489 aa
AA seq
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MSEEILINVTPVETRVATVENGVLQEVYIERSRSKGIVGNIYQGKVVRVLPGMQAAFVDI
GLERTAFIHASDIAALDTDTSEHADIRSKIREGQQLTVQVSKDPMGTKGARLTTRLSVSS
RFLVFMPGAAHIGVSHRIDDETERQRLRTLVESVATGDEADGPIKDGYIVRTVAEGMGDD
EVRADVAFLHRLWAAVERRMKRDTAPSIIYEDLPLFMRTMRDLVRPGLEKIRIDSRESFQ
RVSQFAQDYLPEISAGLEYYPGERPIFDLYSVEDEIQKALGRKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLEETIFKTNLEAAASLARQLRLRNLGGIIIIDFIDMKDAEHRRQV
LRALEKAMEKDYAKTSITGVSELGLVEMTRKRTRESLEHILCETCRYCHGRGSLKSPETV
CYEVFREILREARAYESKRLLVLTSQEVVDRLLDEESANVADLEEFIGASIQFQVETMYT
QEQFDVVLL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagattctgatcaatgtcaccccggtggaaactcgagtggccactgtcgag
aatggtgtgctgcaagaagtctatattgagcgcagccggtctaaaggtattgtcggcaat
atctatcagggcaaagtagtgcgggttttacccggtatgcaggccgcctttgtcgatatt
ggtttggagcgtacggcgtttattcacgcatcagatattgcggcattggacacagatacc
agcgagcacgctgatatccgcagtaaaattcgtgaaggccagcagttgactgtgcaagtg
tcaaaagaccccatgggcaccaagggtgcccgtctgacgacccggttgtctgtgtcttct
cggtttttggtatttatgcctggtgcggcacatattggtgtttctcatcgaattgatgat
gaaaccgagcgccaacgtttgcggacgttggtggaatcggtggccacaggtgatgaagct
gatgggcctatcaaagatggttatattgttcgtactgtggcggaaggcatgggagatgac
gaagtacgggcggatgtcgcctttcttcatcgtctttgggcggcggttgagcgccggatg
aagcgggataccgcgcccagtatcatctacgaagacctgccgctgtttatgcgaacaatg
cgagatttggtgcgaccgggcttagagaaaattcgtatcgactctcgggaaagctttcag
cgggtgagccagtttgcccaggattatttgccagagattagtgcagggctagaatattat
cccggtgagcggcctatttttgacctctatagcgtcgaagacgagattcaaaaagcgttg
ggacgcaaggttgagcttaagtctggtggctatctgattattgatcagacggaagctatg
accaccatcgatattaatacgggggcgtttgttggtcaccgcaatctagaagaaaccatc
tttaaaaccaatcttgaggcggcggcttctttggcccgtcagctgcggttgcgcaatttg
ggcggcattatcattattgattttatcgatatgaaggatgcggaacatcgtcgtcaagtg
ctgcgggcactggaaaaggcgatggagaaagattacgccaagaccagcattaccggcgtc
tctgagttgggcttggtggaaatgacgcgtaagcgcacccgtgagagcctggaacatata
ctgtgtgaaacctgtcgctactgccatggtcgtgggtcgcttaaatcccctgaaactgtg
tgttatgaggtgtttcgagagattttacgagaagcgagagcctacgagagcaagcgtctg
ttagtactgacgtctcaagaggtagtcgatcgcttgttagacgaagagtcggccaatgtt
gctgatctggaggagtttatcggcgccagtattcagtttcaggttgagactatgtacacc
caggagcaattcgatgtggttttgctctag
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