Shewanella polaris: FH971_19820
Help
Entry
FH971_19820 CDS
T06579
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
spol
Shewanella polaris
Pathway
spol00540
Lipopolysaccharide biosynthesis
spol01100
Metabolic pathways
spol01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FH971_19820 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spol01005
]
FH971_19820 (rfaD)
Enzymes [BR:
spol01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FH971_19820 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
spol01005
]
Core region
FH971_19820 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Tudor_4
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QDE33018
UniProt:
A0A4Y5YK79
LinkDB
All DBs
Position
4531872..4532825
Genome browser
AA seq
317 aa
AA seq
DB search
MIVVTGAAGFIGSNLVKQLNAMGRNDIIAVDDLTDGTQMFNLADCEIADYLDKDDFIRQI
QAGDFDNKLEVIFHQGACSSTTEWDGKFMMANNYEYSKTLLHFSQANNCQFIYASSASVY
GGSEKFIEQRELEKPLNVYAYSKFLFDQYVRQQKLTGQVAGLRYFNVYGPREQHKGGMAS
VAFHFNNQMNANGVCRLFEGVDGYENGQQLRDFVFVEDVVKVNLWLWQNPSVSGIYNCGT
GQAQSFNDVANAVIAYHGKGHIEYIPFPEKLKGAYQSYTQADLTQLRTAGYQAEFKTVEQ
AVPEYLDWIKNQHFIGQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggttacaggcgcagcagggtttattggtagtaatttagttaaacaacttaat
gccatggggcgaaatgacattatcgccgtagacgatttaactgacggcacccagatgttc
aatttggccgactgtgaaattgccgattatctcgataaagatgatttcatcaggcaaatc
caagcgggcgattttgataacaaacttgaagtgattttccatcaaggcgcttgctcatcg
actaccgagtgggatggcaagtttatgatggccaataactatgagtattcaaaaacatta
ttgcatttcagccaagccaataactgccaatttatttatgcttcttctgcatctgtttac
ggtggcagcgaaaaatttattgagcaacgtgaacttgaaaagccactgaatgtctacgct
tattctaagttcttatttgatcaatatgtaagacagcaaaaactcaccggccaagtggct
gggttacggtatttcaacgtctatggtccacgcgaacaacataaaggcggcatggccagt
gtggctttccactttaataaccaaatgaacgccaatggtgtgtgtcgtttgtttgaaggt
gttgatggttatgaaaatggtcagcaacttcgtgactttgtgtttgttgaagatgtggtt
aaagtcaatttatggctatggcagaacccatccgtatcgggaatatataactgcggtact
ggtcaagcacaaagcttcaatgatgttgccaatgctgtcattgcgtatcatggtaaaggg
cacattgagtacattcctttccctgagaagcttaaaggtgcttatcagagttatactcaa
gcagacttgacccaattaagaactgctggttatcaagctgagtttaaaacggttgaacaa
gctgtaccagaatatttagattggattaaaaaccaacactttattggtcaataa
DBGET
integrated database retrieval system
