Shewanella polaris: FH971_20325
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Entry
FH971_20325 CDS
T06579
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spol
Shewanella polaris
Pathway
spol03030
DNA replication
spol03430
Mismatch repair
spol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FH971_20325
03430 Mismatch repair
FH971_20325
03440 Homologous recombination
FH971_20325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spol03032
]
FH971_20325
03400 DNA repair and recombination proteins [BR:
spol03400
]
FH971_20325
Enzymes [BR:
spol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FH971_20325
DNA replication proteins [BR:
spol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FH971_20325
DNA repair and recombination proteins [BR:
spol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FH971_20325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QDE33109
UniProt:
A0A4Y5YKW3
LinkDB
All DBs
Position
complement(4643766..4644380)
Genome browser
AA seq
204 aa
AA seq
DB search
MKLANQVVVLDFETTGLSPDNGDRAIEIGAVKLVNGQIVDTFQELINPGQRVNSFIEQYT
GISNDMLKHALVSKQVMGQFSKFIDGFNLVAHNASFDKKFLDAEFSHSKLHYNGQFACSL
LLSRRISQEAPNHKLGTLVDHHQLPNDGVFHRALADATMTSHLWLHQIDVLQQQLPKQAI
TIELINKISSLPKAQIARYLRTMS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgctaaccaagttgtggtgctcgattttgaaaccacaggattatcaccagat
aacggtgaccgagccatagaaattggtgcggttaagttagttaatggtcaaatagtcgat
acttttcaggaattgattaatcctggtcagcgagtcaatagctttattgagcaatacaca
ggtattagcaatgacatgctcaaacatgccctagtatccaaacaagttatggggcagttt
tccaagtttattgatggttttaatttggtggcacacaatgccagctttgataaaaagttt
ctcgatgctgaatttagtcatagcaaactgcattacaatggtcagtttgcttgctcgtta
ttattgtctcgacgtattagccaagaagcccccaaccataagcttggcacacttgtagat
catcaccagttacctaacgatggtgtgtttcaccgagccttggctgatgccaccatgacc
agccatttatggttacatcaaattgatgtattacagcagcaactgcccaagcaagctatt
accattgaactaatcaataaaatatccagccttccaaaagctcaaattgcacgctatttg
cgaacgatgagctag
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