Flagellimonas maritima: HME9304_03269
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Entry
HME9304_03269 CDS
T05505
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spon
Flagellimonas maritima
Pathway
spon03030
DNA replication
spon03430
Mismatch repair
spon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HME9304_03269 (holA)
03430 Mismatch repair
HME9304_03269 (holA)
03440 Homologous recombination
HME9304_03269 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spon03032
]
HME9304_03269 (holA)
03400 DNA repair and recombination proteins [BR:
spon03400
]
HME9304_03269 (holA)
Enzymes [BR:
spon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HME9304_03269 (holA)
DNA replication proteins [BR:
spon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HME9304_03269 (holA)
DNA repair and recombination proteins [BR:
spon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HME9304_03269 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Resolvase
EamA
Motif
Other DBs
NCBI-ProteinID:
AWX46237
UniProt:
A0A2Z4LY42
LinkDB
All DBs
Position
complement(3603241..3604242)
Genome browser
AA seq
333 aa
AA seq
DB search
MDKVKDIVSAINNGIPKPIYFLMGDEPYYIDKISKYISDNVLTEDEKGFNQMVLYGRDTS
VDDIVANAKRFPMMAQHQVVIVKEAQHLSRSIENLVSYVENPQTTTVLVVCYKYKKLDKR
KKLYKSIQKNGELFESKKLYENQVSEWIRRTLSGKKYKISPKACMLLVEFLGTDLSKISN
EFDKLTIVVPSNIEITPTLIEKHIGISKDFNNFELKKAIGEKDVGKATQIINYFSQNPKD
NPFVVTVTLLNTFFTQLLQYHGLKDHSPGNVSKVLGVNPYFVNEFTVAAKNYPMKKVSSI
ISGLRRLDLKGKGVGAGKIDQADLLKELLVQII
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtaaaggatattgtatcggctattaataatggtattcctaagcctatttat
tttttaatgggcgatgaaccatattatatagataaaatttcaaaatatatctctgataac
gtactgaccgaagatgagaaaggatttaaccaaatggtactttacggtcgtgatacaagt
gtggacgatattgtagccaatgcgaaacgttttcccatgatggcccaacatcaagtggta
attgtaaaggaggcccaacacctttcacgtagtattgaaaatttggtcagttatgttgaa
aatcctcaaactactaccgtcttggtagtctgttataaatacaagaagctggacaaaaga
aaaaagctttataaatcgattcaaaagaacggggaactttttgaaagcaagaagctttac
gaaaatcaagtttctgaatggatcagaagaacgcttagtgggaagaagtataaaatttcc
ccaaaagcgtgcatgttacttgtagagtttttggggaccgatttgagtaaaatcagtaac
gaatttgataagctcaccatagttgtaccttccaatattgagataacccccaccttaata
gaaaagcatataggtatcagtaaggatttcaacaattttgagcttaaaaaagccattggc
gagaaagacgttggcaaagcaacacaaattatcaactatttttcacaaaatccaaaggac
aatccgttcgtagttacagtaacgctcttaaacaccttttttacgcaactattacaatat
catggacttaaagaccactcgccaggcaatgtttcaaaagtattgggagtaaatccgtat
tttgtaaatgaatttacggttgcagcaaaaaattatccaatgaaaaaagtcagtagcata
atttctggactacgtagactcgatttaaagggaaagggagtaggagccggtaaaattgac
caagctgatttattaaaggaactactcgtgcaaattatttag
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