Sporosarcina sp. Te-1: J3U78_00605
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Entry
J3U78_00605 CDS
T08181
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J3U78_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoo03400
]
J3U78_00605
DNA repair and recombination proteins [BR:
spoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J3U78_00605
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GFIT
Motif
Pfam:
Ku
DUF1249
CDC24_OB3
Prok-RING_4
zf-Di19
Inhibitor_I9
Motif
Other DBs
NCBI-ProteinID:
QTD41406
UniProt:
A0A975C963
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Position
complement(120994..121821)
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AA seq
275 aa
AA seq
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MHTIWKGSISFGLVNIPIKLHAATENNDVKLRQLHKECHSPISYQKVCPVCEKEIQNEDI
VKAYEYTKNKFVVLDDEELEKLKKENEDKAVEIIDFVKLEEIDPIYFERSYFMAPDASGG
KAYALLRKALQESGKIGVAKIIIRSKEQLAVVRVYKDALLMETIHFPDEVRNVQEVPNIP
NEDSVVQKELDTALLLVDQLTTAFDPTKYTDEYRTALMELIEEKKSGNRTVAASEKQPAA
PANVTDLMAALQASLDKTKKKKPATRKKAAAKKNA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcatactatttggaaaggaagcatcagcttcggtcttgtcaatatcccgattaaactg
catgcggcaacggaaaacaacgatgtcaaattgcgccagctccataaggaatgtcattca
ccgatcagttatcagaaagtatgcccggtttgcgaaaaggaaatccaaaacgaagacatt
gtaaaagcgtatgaatatacgaagaacaagttcgtggtgcttgatgatgaggaattggag
aagttaaaaaaggagaatgaagacaaagcagtggaaattatcgactttgtcaaactggag
gaaatcgacccgatttattttgaacggagctatttcatggcaccggatgcaagtggcggc
aaagcgtacgctcttttacgtaaagccctccaagaatccggaaagatcggggtagccaaa
atcatcatccgttcaaaagaacagctggccgtggtccgtgtctacaaagatgcactatta
atggaaacaatccattttcccgacgaagtgcggaatgtacaggaagtacccaatattcca
aatgaagactccgtcgtccaaaaagaattggataccgcactcttattagttgaccaatta
acgactgcgtttgatccgaccaaatatacggatgaataccgtaccgctctaatggaattg
atcgaggagaaaaaatctggcaaccgtacagtggcagcgagcgagaagcagccagcagct
ccagccaatgtgaccgatttaatggcagccctccaagcttccctcgacaaaacgaaaaag
aaaaagcctgccacgaggaaaaaagctgctgcaaagaaaaatgcgtag
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