Sporosarcina sp. Te-1: J3U78_14485
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Entry
J3U78_14485 CDS
T08181
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
spoo
Sporosarcina sp. Te-1
Pathway
spoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J3U78_14485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spoo03000
]
J3U78_14485
Transcription factors [BR:
spoo03000
]
Prokaryotic type
Helix-turn-helix
Other families
J3U78_14485
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
TPR_12
SNAP
TPR_2
HTH_31
TPR_1
RPN7
Motif
Other DBs
NCBI-ProteinID:
QTD40025
UniProt:
A0A975C549
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Position
complement(2803469..2804725)
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AA seq
418 aa
AA seq
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MVGALIKIERLKQNLKLEALARGICSTSHLSRIENGKVQVSDDIKCLLEARLGVGLIEEK
QQKYVDITDIENRYAQAINFRDGASAAKLTCEISEMLTEHTFNFHTRIDLELLALRMKFV
IRNNKDVLQVLSTYFEMQQELTPVQNFRIYQMQGMALYTNGQFKDCLEAYAKATLQMERL
QLSSFERADLAFAQAVAFVANEDPYNALEQSRTALHYFQSIMAIRRVVECHIICGIAHKK
NGQTLKALDMFKFAEQICLQNGLESFLGIVHQNIGDVFSEIRETEIAISHFKKAMNYKEK
PLELMYTILSLIVEYERIKEYENASHWLEKGYYLLPKLSRKKREYYETHFNVYQALCGED
IQQLEKALKTAVGVFSKRRNEAEWKDYAKRLAKFYVDKRMYKKAVYYYELILDRSGIK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggtaggagcgttaattaaaattgaacgactgaaacagaatttgaagcttgaggcattg
gcaagggggatttgttcgacttcccatttaagtaggatagagaatggaaaagtacaagta
agtgatgatatcaaatgtctcttggaggctcgtttaggggtaggactcatagaggaaaag
caacagaaatacgtggatataacagatattgaaaatcgttatgcccaggcaatcaatttt
cgtgatggtgcaagtgcagctaagttaacctgtgagatatctgagatgttaacagagcat
actttcaattttcatactcgcatagatttggaattattagcattacgaatgaaatttgtt
atacgaaacaacaaagacgtgctacaggttctgtctacttattttgaaatgcagcaagag
ttgactcctgtccaaaattttcgtatatatcaaatgcaaggaatggcattgtatacgaat
ggccaatttaaagattgtttagaagcatatgccaaagcgacattacagatggaacgcttg
caactatcatcattcgaacgagcagatttagcgtttgcgcaagcggtagcgtttgttgcg
aatgaagacccatataatgcactggaacaatcaagaacagcgcttcactattttcaatcc
attatggcgataagaagggttgtggaatgccatattatttgtgggattgctcataaaaag
aatggccaaactttaaaagcgctcgatatgtttaaatttgctgaacagatttgtttgcaa
aatgggctggaatcctttttaggcattgtacaccaaaacataggggatgttttttctgaa
attagagagacagagatagctatatcgcatttcaaaaaagcaatgaactataaagagaag
ccgcttgaattaatgtataccatcctttcattaatagttgaatatgagcgtattaaggag
tatgaaaacgcttcacattggttggaaaaaggttattatctgttaccaaaattgagcagg
aaaaagagggagtattatgaaacgcatttcaatgtatatcaggccttatgtggtgaggat
atacagcaattggaaaaggcattaaagaccgctgttggtgtcttttcgaaaaggcgtaat
gaagccgagtggaaagattatgcgaagcggcttgcaaagttctatgttgacaagagaatg
tataaaaaagcagtttactattatgaattaattttggataggagtgggataaaatga
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