Sporosarcina sp. Te-1: J3U78_21585
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Entry
J3U78_21585 CDS
T08181
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spoo
Sporosarcina sp. Te-1
Brite
KEGG Orthology (KO) [BR:
spoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spoo03016
]
J3U78_21585 (thpR)
Enzymes [BR:
spoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J3U78_21585 (thpR)
Transfer RNA biogenesis [BR:
spoo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J3U78_21585 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QTD41275
UniProt:
A0A975C7M0
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All DBs
Position
complement(4270634..4271179)
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AA seq
181 aa
AA seq
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MSAHYFIGMKAPAAVRPIAEAYQNQLGLSSLYKVLPYEEDLHMTLLFIGSLADSLIEPLT
EMLSSLSSQHKKFALEINHLSYFGLSKGPRVVYLGVEHSDALVSLQQDIYHHCHDLLSRS
EENRFTPHITIAKKLKPMTGKPIAKETFEGVPFEAGGFSLYTIHPDQSPKYEEIGYFKLS
M
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccattattttatcggtatgaaagctcccgcggcggttcggccaattgcagag
gcgtatcaaaatcaactcggcctttccagcttgtacaaggtgctgccctatgaagaggat
ttacatatgacactcttgttcatcggctcacttgccgattctctcatcgaaccgttgact
gaaatgttgtcgtccctttcatctcagcacaaaaagtttgctcttgagatcaaccatctt
tcctatttcggattgtcaaagggcccgcgtgtcgtctatttaggggtggagcactcggat
gctctcgtttcgttgcaacaggatatctatcaccattgccatgatctattgagtcgatct
gaggaaaaccggttcactccgcacattacaatcgcgaaaaaactgaaaccgatgacaggg
aagcccattgccaaggagacctttgaaggagtaccattcgaagcaggtggtttttccctt
tatacgattcatcctgaccaatcccctaaatatgaggaaatcggttattttaagctctct
atgtag
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