Sphingobium phenoxybenzoativorans: KFK14_19140
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Entry
KFK14_19140 CDS
T07582
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KFK14_19140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spph03400
]
KFK14_19140
DNA repair and recombination proteins [BR:
spph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KFK14_19140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QUT05097
UniProt:
A0A975Q180
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All DBs
Position
complement(3874498..3875373)
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AA seq
291 aa
AA seq
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MPARAYWQGQIKLALVSIPVEIYPATKSGAAVSFRQIHEPTGKPIHYEKVVSGVGPVDRD
EIFKGFELSKGNYVLLEQDEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVIPADGL
AEEAYAVLRDALRQTKKVGLGQLSVRGREQLVSLKPCGRGLVLEVLRYADEVTKAQTYFR
GLPDDVADEDMLDLAVSIIDKRTAPFKPEEFHDRYVDALHRLIDKKKKAKGKRIIEEVDD
APMGRKGGNVIDLMAALKKSAGAGGRKTSAAPKAPVNKGAPKKAASKRKSA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcgcatattggcaaggacagatcaagttggcgctggtttcgattccggtg
gagatatatcccgcaacgaagtcaggtgccgcggtcagtttccggcaaattcatgagccg
acgggcaagccgatccattatgaaaaggttgtgagcggcgtcggtcctgtcgatcgcgac
gagatattcaagggctttgaactgtccaaaggcaattatgtcctgctggagcaggacgag
atagaagcagtgaagatcgagagccgcaaaaccctcgatctggttcagtttgtcgaggcg
gacgcgatcgacgtcctctactatgaaaagccctatttcgtgatccccgctgatggcctg
gcggaggaggcttatgctgtgttgcgcgatgctttgcgccagacgaaaaaggttggcctt
ggccaactgtccgtacgcggtcgtgagcagttggtctcgcttaaaccctgtgggcgcggg
ttagtgctggaagtgctgcgttatgccgatgaggtgacaaaagcacagacctatttccgg
ggcctgcctgacgatgtagcggatgaggatatgctggaccttgcggtcagcatcatcgac
aagcgcaccgcgcccttcaaaccggaagagttccatgaccgctatgtcgatgcgcttcat
cgcctgatcgacaagaagaaaaaggcgaagggcaagcgcatcattgaggaggtcgatgac
gcgcccatggggcgtaagggcggcaatgtcatcgacctgatggcggcgctcaaaaagtcg
gcgggcgcaggcggacgtaagacctctgctgcgccaaaagctccggtaaataagggcgcc
cccaaaaaggctgcgtcaaaacgcaagagcgcatga
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