Staphylococcus shinii: JMB28_12100
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Entry
JMB28_12100 CDS
T08256
Symbol
rlmB
Name
(GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
KO
K03218
23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:
2.1.1.185
]
Organism
spsd
Staphylococcus shinii
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsd03009
]
JMB28_12100 (rlmB)
Enzymes [BR:
spsd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.185 23S rRNA (guanosine2251-2'-O)-methyltransferase
JMB28_12100 (rlmB)
Ribosome biogenesis [BR:
spsd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JMB28_12100 (rlmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QRA16360
LinkDB
All DBs
Position
complement(2526564..2527313)
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AA seq
249 aa
AA seq
DB search
MEEIVIVGRHAVKEAIVSGHTINKILIQDTIKKGQINEILKKANNRKIIVQSVPKSKIDG
LSDSPHQGIAAYIAPYEYADFDAFLEKQKAQDKLSTVLILDGLEDPHNLGSILRTADASG
VDGVIIPKRRSVALTQTVAKASTGAIQHIPVMRVTNLANTIETLKDNGYWVVGTEADNST
DYREMDVAMPLAIVIGSEGQGMSRLVKEKCDFYINIPMVGHVNSLNASVAASLMMYEVFR
KRNNTGDKT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatcgtaatcgttgggcgacatgctgtgaaagaagcaatcgtttcagggcat
acaattaataaaattttaattcaagatactatcaaaaaaggccaaattaatgaaatttta
aaaaaagcaaataatagaaaaattatagttcaatcagtgccaaaatcaaaaattgatgga
ttatctgactctcctcatcaagggatagcagcttatattgcgccatacgaatatgcagat
tttgatgcgtttttagaaaagcaaaaagcacaagataaactatctacggtattaatatta
gatggtttggaggatccgcataatttaggatctatcttgagaactgcagatgcttcaggt
gttgatggcgtcatcatacctaagagacggtcagtagcattaacacaaactgtagctaaa
gcatctactggtgcgattcaacatataccagttatgagagtgaccaatttagccaataca
attgaaacattaaaagacaatggctattgggttgtgggtacagaagcggataactctacg
gactatagagaaatggatgtagcgatgccgttagcaatcgttattggtagcgaaggccaa
ggtatgagtcgtttagtaaaagaaaaatgtgacttttatatcaatatcccgatggttgga
catgtaaatagcttgaacgcctctgtagcagcgagtttaatgatgtacgaggtatttcgt
aaacgtaacaacactggagataagacatga
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