Shewanella psychropiezotolerans: FM037_14870
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Entry
FM037_14870 CDS
T07745
Name
(GenBank) efflux RND transporter permease subunit
Organism
spsh
Shewanella psychropiezotolerans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
PrgH
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QDO84280
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Position
3365800..3369021
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AA seq
1073 aa
AA seq
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MSDTNQTSAPSAGEQETQTGIIAWFARNSVAANLLMLIIILGGLLTADTIRKQFFPQIEI
NWVEFNAFYPGAAPQEVEEGITIKVEEALESVQGLKRVITYSNRNSATGYFRIEDSYNPQ
IVLDEIKSAIDSISSFPDGMERPKVERIKLRQEVLYMSLYGDMTPRQLKVLGEKIHDELM
QLPLVNITDFYGGLDYEIAIEVSRDRLREFGLTFNDVAAAVRGFSRNMSAGQIRAENGYI
NLRIQNQAYVGYEFENLPLITLQDGTNVLLGDIATVIDGFEEGIQYSKFNGKNSVTFFIG
AANDQSMTDVADIVKAYVAEKQQVLPDGLKLETWVDMTYYLEGRLDLMLDSMKTGAVLVF
LMLALFLRVRLAFWVMMGLPVCFLGTLLFMPMPMLDVTVNVISLFAFILVLGIVVDDAIV
MGESAHDECEKNGQSLENVIRGVKRVAMPATFGVLTTIAAFLPLTLDDGPSSAFGKAIGY
IVILCLIFSLVESKLILPSHLARMKPRTKVKPGSKNPLDWLRNGVNFIQGKVDTGLQYFI
QNIYRPALTSAVKYRYTVIMLFISFILICAGLYAGGMIRFIGQPKIPHDFPRVNFEMNVD
ASEKATLSAALAIEKAIYDVDKRLEEQYGQGMISDMQVDLKGRTSAEVMTKLVDPELRPL
DTFELAELWRQAMPLIPGMKSFEIQDNLFGGGRDDGDISFRLEGKDEQQLIAASNELKAK
LNSLKGVGDVNDSRQSSAKEVQFKLKPQAYGLGLTLADIASQVGNSFYGLEAQRILRHGS
EIKVMLRYPERERNSIAQVSEVLIVTPEGAEVPLSEVVNITVTQGVNGIRRENGNRTINV
WASVDADQAEPFKLAQDIRDNFMPQLLKKYPRVQSEVSGNIQEQMDSAKTQLRDFIISML
IIYSLLAIPLKSYSQPIMIMAVIPFGVIGSVLGHMIMGIDLSALSLFGIIAAAGVVVNDS
LVMVDYINKSREVGIAMKTAVLEAGCRRFRAIMLTSLTTFIGLMPIMTETSMQAKMVIPM
ATSLAFGVLFATVVTLMLIPCLYLAIEDIKKLVGSKSRVQHDDDHAMEPELIK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacactaatcaaacatctgcgccttcggctggcgagcaagaaacacaaactggc
atcatagcctggtttgctcgcaacagtgtcgcggctaacctcttgatgctcattatcatc
ttaggtggtctcttgaccgccgacaccatacgtaaacagtttttccctcagattgagatc
aactgggtcgagtttaatgccttctatcccggcgctgcgcctcaagaagtagaggaaggc
atcaccataaaagttgaagaggcgctggagagtgttcaggggctcaaacgtgtgatcacc
tattctaaccgaaactcggccactggttattttcgtatagaggactcttacaatccacaa
atcgtactcgacgagataaaatctgccatcgactccatatccagtttccccgatggcatg
gaaaggcctaaggtcgagcgcattaaattgcgtcaggaagtgctctatatgagtttgtac
ggtgatatgacgccgagacaactcaaggtactaggtgaaaaaatccatgatgagttgatg
caacttcccttggttaacatcaccgatttctacggcggtcttgattatgagatagccatc
gaagtgagtagagacaggttgcgagagtttgggctcacgttcaatgatgtagccgcagcc
gttcgcggcttctcccgtaacatgtcagcgggtcagatccgcgccgagaacggttacatc
aaccttagaattcaaaatcaggcctacgttggttacgagttcgagaacctgcccttaatc
accttacaagacggtaccaatgtgctcttgggagatatcgccaccgtcattgacggtttc
gaagagggcattcaatattcgaagtttaacggtaaaaactcggtcactttctttatcggg
gccgcaaacgatcaaagcatgacagatgtagccgatatagttaaagcctatgtggctgag
aaacagcaagtgctacctgacgggcttaagctagagacttgggtagacatgacctattat
cttgaaggccgtttagatctcatgttagatagcatgaaaactggtgcggtgctggttttc
cttatgttagccctattcctgcgggtgcgcctggcattctgggtcatgatgggtctgccg
gtttgtttcctcggcaccctactcttcatgcctatgccgatgctcgatgtcacagtgaac
gtgatcagcctgtttgccttcatcttagtactgggtatcgtggtggatgatgccatcgtc
atgggtgagagtgcccacgatgaatgtgagaaaaatggccagagtctggaaaatgtcatc
cgtggtgtaaaacgtgtcgctatgcctgcaacattcggcgtactgaccaccatagctgca
tttttaccactgactcttgatgacggtccctcctctgctttcggtaaagccataggctat
atcgtgatcttgtgtctgatattttccttggttgagtctaagctcatcttgccatcacat
ttggccagaatgaaacctagaaccaaggttaaacctggctctaaaaatcctttggattgg
ttacgtaatggcgtgaactttattcaaggcaaggtcgatacgggtctacagtattttatt
cagaatatataccgcccggcgctcaccagtgccgttaagtatcgctatacggttattatg
ctgtttatcagtttcatactgatctgtgcagggctgtacgccggtggcatgatccgcttc
atcggacagcccaagatcccccatgattttcctcgggtgaacttcgagatgaacgtggat
gcctctgagaaagctaccctttctgcggcactggctatcgagaaggccatctatgatgta
gataagcggctggaagagcaatatggtcaaggcatgatctcagacatgcaggtcgatctt
aagggacgtacttcggcagaagtcatgaccaagctggtggatcccgagcttaggccctta
gataccttcgagcttgctgagctatggcgtcaagccatgcctctcataccgggaatgaag
tcattcgagattcaggataacttgttcggtggtggtcgtgacgatggtgacatcagtttc
cgcctggaaggaaaagatgagcaacaattgattgccgcctcgaatgaactcaaggctaag
cttaactcgctcaaaggtgtcggtgatgtcaacgacagtcgtcaatccagtgctaaagag
gtacagtttaaactcaagcctcaggcctatggtctgggtctcaccttggccgacatagcc
tctcaggtaggtaacagcttctatggcttggaagcccagcgtatcttgagacatggctct
gagataaaggtgatgctgcgctatcccgaaagagagcgtaactccattgctcaggtcagc
gaagtattgattgtcaccccagaaggtgccgaagttcccctttcagaagtggtcaatatc
acagtcactcaaggggtcaatggcattcgccgtgaaaacggtaaccgtaccattaatgtc
tgggcctctgtggatgccgatcaagccgagcccttcaaactggctcaggacattcgtgat
aactttatgcctcagctgctaaagaaatatccgcgtgtacaaagtgaagtatcgggaaat
atccaggagcagatggacagcgctaagactcagttaagagactttatcatctccatgttg
atcatctatagcctgttggccatcccactgaagtcatactcccaacccataatgatcatg
gctgttatccccttcggcgtcataggctcagtgctcggccatatgatcatgggaatcgac
ttaagcgccctttccctattcggtattattgctgctgccggtgttgtagtgaacgattca
ctggtgatggtggattacatcaacaagtcccgagaggtgggaattgcgatgaagacggcg
gtacttgaggcgggttgcagacgtttcagagccatcatgttgacctcgctgaccaccttt
atcggcttgatgcccatcatgacagaaaccagcatgcaagctaagatggtgatccctatg
gcaacctccctcgccttcggtgtcctgtttgccactgtggtcaccctgatgctgatccca
tgcttgtatctcgctatcgaagatattaaaaagctagtcggcagcaagtcacgtgttcag
catgacgatgatcacgccatggaaccagagctgataaaatag
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