Shewanella psychrotolerans: K0I62_06075
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Entry
K0I62_06075 CDS
T09306
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsj03016
]
K0I62_06075 (truC)
Enzymes [BR:
spsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
K0I62_06075 (truC)
Transfer RNA biogenesis [BR:
spsj03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
K0I62_06075 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
EarP
Motif
Other DBs
NCBI-ProteinID:
QYK02513
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All DBs
Position
1351036..1351866
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AA seq
276 aa
AA seq
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MNQDKALHEQLADENQAIDLAEEQAPEIQILFEDEDVVVIHKPAGLLVHRSYLARRERFF
AMQMTRDKVGCHVFPVHRLDRPTSGVLLFAKSGEMANVLCEQFAAKEVEKQYLAIVRGNI
LQGDILDYPLKQEFDELGDKHVDPNKAAQEAQTSYQPLLNCEIPYPSGRYATSRYCLVKL
TPHTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNRFIREQFGINRLWLIAKKLSFNHPRTG
LRISVETDLEQEWHTLFGEFGWGDEALDINASQLIC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaagataaagcattgcatgaacagcttgctgatgagaatcaagctattgactta
gctgaagaacaagcgccagaaattcaaatcctgtttgaagatgaagatgttgtggttatt
cataagcccgcaggtctgctggttcatcgcagttaccttgcgaggagagagcgatttttt
gcaatgcaaatgacccgggacaaagtgggttgtcatgtatttccggtccatcgattagat
agacctacatcaggggtattattgtttgctaaaagcggtgagatggccaatgtactgtgt
gagcagtttgcagctaaagaagttgaaaaacagtatcttgcaattgtgcgtggtaatatt
ttacagggagatatactcgattatccgctgaagcaagagtttgatgagttaggcgataaa
catgtcgatccgaataaagcggcccaggaagcgcaaacaagttatcagccgttgctcaat
tgcgaaattccctatccatcaggaaggtatgcgactagccgttattgcttagtaaagctt
acgccacatacagggcgtaaacatcaattacgtcgtcatatggcgcacctacgtcatcct
attataggtgatacgacccatggcgatggtaaacagaatcggtttattagagaacaattt
ggtattaatcgtttgtggttaattgcgaagaaacttagttttaaccatcctagaactgga
ttacgtatcagtgttgaaactgacttagagcaagaatggcatactttattcggggagttt
ggatggggggatgaagcgttagatataaatgctagtcaactgatctgctga
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