Shewanella psychrotolerans: K0I62_09855
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Entry
K0I62_09855 CDS
T09306
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00550
Peptidoglycan biosynthesis
spsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I62_09855 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spsj01002
]
K0I62_09855 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsj01011
]
K0I62_09855 (dacB)
Enzymes [BR:
spsj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I62_09855 (dacB)
Peptidases and inhibitors [BR:
spsj01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
K0I62_09855 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
spsj01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
K0I62_09855 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Beta-lactamase
Ten1_2
Motif
Other DBs
NCBI-ProteinID:
QYK03278
LinkDB
All DBs
Position
2227187..2228617
Genome browser
AA seq
476 aa
AA seq
DB search
MILILGSTLSFSAQADSDINQYLTNMMSVIKSPYSQVGVVAFDLASDTSIFEYNANSLMI
PASTQKLLTAVAATAQLDENLTFDTRLYSRSPIRHGKLLGDLYLQFSGDPTLTSDDLRQL
FKQLSNLGIYDITGDLYLVSQADEQFKAPGVVWDDLGICYAAPVSRFVINQNCIQGQLIP
MLATNEAKLSFPSYLPVKITTTAYFDKNKQQEFCELSLQRLAKNQFHISGCVSGDKPLKL
AIAISEPDLYAQQLVAQLTTSAKIRVKGKVKLTHTLDKSAKLIAEHRSRPLSSLIETMLL
KSDNLIADRLFKAIGESVYDQPGSFTNGAKAMVRILTDAGVDLTHSQIVDGSGLSRYNLL
SASQLMQVLHLVYQEPHFAHLIGKLPVAGQSGTLRYKSGYNKAPLKDKVIAKTGSMQGVD
NLAGFLTIDSEHQVLFAILENGQSPQTEQAQLAPFSALFLQTLLDFSRSFQQTASP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatattaatacttggttcaactttaagttttagcgcgcaagcagactcagatattaat
cagtacttaaccaacatgatgtcagtgatcaaatcgccctactctcaagtgggggtcgta
gccttcgacttagcatctgatacatctatttttgaatacaatgccaatagcttgatgatc
ccagctagcactcaaaagctactaaccgcagtggcggcgaccgctcagcttgatgaaaac
ttgaccttcgatacccgcttgtattcaaggtcgccaattaggcacggtaagctacttggg
gatctctatttgcaatttagtggcgatccaacgttgacgagtgatgatcttaggcaactt
tttaagcaactaagcaatttagggatctatgatattactggcgatctctatttagttagt
caggctgacgagcagtttaaggcgccgggggtcgtttgggatgatttgggaatttgctat
gcggctcccgtatcgcgtttcgtgataaaccaaaactgtatccaaggtcagttaatccct
atgctggccaccaatgaggctaaactgagctttcctagctatcttcccgtaaaaattacc
accaccgcctattttgataaaaataaacaacaggagttttgtgagctgtcgttacagcgc
ttggccaaaaaccagtttcacattagcggctgcgttagcggcgataaaccactgaagcta
gctatcgctatttcagagcccgatctttatgcgcagcagctggtggcacaactgaccacc
tcagcaaagatacgggtcaaaggaaaggttaaattaacccatactcttgataagagcgct
aagcttatcgcggagcataggtcgcggcccttatcatcgttaatcgaaaccatgttatta
aaatcagataatttgatcgccgatcgtttatttaaagccataggtgaaagcgtctatgat
cagccaggcagctttactaacggcgcgaaagctatggttcgaatattgaccgatgctggt
gtggatttaactcattcacagatcgtcgatggttcgggcttgtcacgttataacttactg
agtgcaagccaattaatgcaggtattgcatctcgtttatcaggagccgcattttgcacat
cttattggtaagctacccgttgcgggccaaagcggtacgctgcgttacaaaagcggatac
aataaagcaccgttaaaagataaggtgattgcaaaaacgggatcgatgcaaggggttgat
aatttagcgggttttttaactatcgatagtgagcatcaagtcctatttgccatattagaa
aatgggcaaagccctcaaaccgagcaagcgcaacttgctccatttagcgcacttttttta
caaacactattagatttctctcgctcttttcaacaaactgctagcccctaa
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