Streptococcus pseudoporcinus: NCTC13786_01000
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Entry
NCTC13786_01000 CDS
T07156
Symbol
sigV
Name
(GenBank) RNA polymerase sigma factor protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
spsu
Streptococcus pseudoporcinus
Brite
KEGG Orthology (KO) [BR:
spsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsu03021
]
NCTC13786_01000 (sigV)
Transcription machinery [BR:
spsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC13786_01000 (sigV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
UPF0122
Terminase_5
Mga
Phage_antitermQ
HTH_28
HTH_40
HTH_23
Motif
Other DBs
NCBI-ProteinID:
VEF93690
LinkDB
All DBs
Position
1:1059864..1060340
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AA seq
158 aa
AA seq
DB search
MAYSQEIIGYLVNSGVSPNQAQDVTQDVFLQMLECNYSIPLEKIRSWMYRTAIRRYIDLY
RRDRHYHELLQKDFFSQQAVTAYDLGDYDDLYDAISQLDDKAQLLLDLYYFQGFSIKEIA
AITGYSQSNIKIRLMRLRQLLKKQLQLKGYPNDHYKNN
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcctattctcaagagattataggctatctggtcaattctggggtttcaccaaatcag
gctcaagatgtcacccaagatgttttccttcaaatgctcgagtgtaactattctatacct
ttggaaaaaatccgatcctggatgtaccgtacagccatacgtcgctacattgatctttat
cggcgagatagacactaccatgagcttcttcaaaaggacttcttttcccaacaagctgta
acagcctatgatttaggtgattacgatgacctgtatgatgctatcagccaacttgatgat
aaggcccaactccttttagacctttattattttcaaggcttttcgattaaggaaatagct
gccattacaggttattcccaaagtaatattaaaatccgactgatgcgactgcgacagctt
ctcaaaaaacaattacaactgaaaggatacccaaatgaccactataaaaacaactga
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