Shewanella psychrophila: Sps_01253
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Entry
Sps_01253 CDS
T05063
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
spsw
Shewanella psychrophila
Pathway
spsw00470
D-Amino acid metabolism
spsw00550
Peptidoglycan biosynthesis
spsw01100
Metabolic pathways
spsw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sps_01253
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sps_01253
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sps_01253
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsw01011
]
Sps_01253
Enzymes [BR:
spsw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sps_01253
Peptidoglycan biosynthesis and degradation proteins [BR:
spsw01011
]
Precursor biosynthesis
Amino acid ligase
Sps_01253
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
AQS36422
UniProt:
A0A1S6HLP0
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All DBs
Position
1376372..1377382
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AA seq
336 aa
AA seq
DB search
MSQTNLLLLCGGGGDEHAISLMSAKFFETSLAKLAHINLLKVELDAQGHYRTSDGELCEL
TNRKQIRFDDVSKVSWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGCDSEASRNCFNK
VTAKMWFTALGIPNTPYIFLNDFNDDAINQAKRALTSWGSIFIKAASQGSSVGCYRVDSK
EELTESLKQAFNYSPYVIVEKTIEARELEVAVYEKNGEIIATQPGEIICGTNTFYTFDEK
YAENSQAETKVVADISESVSQEIREYAVKVFKGMKLSHLSRIDFFLTQDNEILLNEINTF
PGLTPISMFPKMLQNHGDDFSDYLNRNIMDQLSKNV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacgaatctactattattatgtggtggcggtggggatgaacatgcaatctca
ttgatgtcagcgaaattttttgagacctcattggccaaacttgcccatataaacctattg
aaagtcgaacttgatgcacagggccattatcgaactagcgacggtgaactctgtgaactg
accaatcgcaaacaaatacgtttcgatgacgtgagtaaagtatcctggcctgtggattac
gtcattccctgcattcacggttaccctggagaaacaggtgatattcaatcctattttgag
ctgatcaacttgccctattttggttgcgattcagaagcgagtcgtaattgtttcaacaaa
gtcacggctaagatgtggttcacggcacttgggatccccaataccccttatattttcctc
aatgactttaatgatgacgctatcaatcaagccaagcgggctttaacatcttggggctcg
atattcatcaaggccgcgtcacaaggctcatctgttggttgttaccgtgtagacagcaaa
gaggaattaactgagtcattgaagcaagctttcaactattcgccttatgtcatcgtcgaa
aagaccattgaagccagagagcttgaagtggccgtatacgagaaaaacggcgaaattatc
gcgactcagccaggtgagatcatctgtgggacaaataccttctacactttcgatgaaaag
tacgccgagaacagtcaggccgaaaccaaagtggttgccgatatcagtgagagtgtgagc
caggagatccgtgaatatgcagtcaaggtattcaaaggcatgaaactcagtcacttgtcc
cgtatcgactttttcctcacccaagacaacgaaattcttctcaatgaaattaatactttc
ccagggctcacccctatctccatgttccccaagatgttacagaatcatggcgatgatttc
agcgattacctcaaccgcaacatcatggaccaactgagtaagaacgtctga
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