Strongylocentrotus purpuratus (purple sea urchin): 115926597
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Entry
115926597 CDS
T01019
Name
(RefSeq) general transcription factor IIH subunit 3-like
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03022
Basal transcription factors
spu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115926597
09124 Replication and repair
03420 Nucleotide excision repair
115926597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
115926597
03400 DNA repair and recombination proteins [BR:
spu03400
]
115926597
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115926597
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115926597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
115926597
NCBI-ProteinID:
XP_030847297
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MSSTDDEDVGNLVVIVIDVNPVWWGKQSHHKQQKDGLALSQCMDAVVVFINSHLMMDRRN
KVAVIASHTNESRFLYPKKTSDAFDDGDDQREQDEMSSDGKYEVFASINDTVMEELKNLV
DENPTVSHTDTLLAGSLAMALCYIHRVEKECAVGEKIKSRILVLKAADDSASQYMNFMNV
IFTAQKQNIPIDACILDKDSSLLQQACDITGGKYLKLLSTTGLLQYLLWVYLPSPSQRDS
LVLPPAIHVDYRAACFCHRILIDVGYVCSVCLSIFCTYSPICSTCHTAFRIKGAPSKMKR
KKKSSAVASIT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacagatgatgaagatgtaggaaatctggttgtcatagtgattgatgttaat
ccagtttggtggggaaaacagagccatcacaagcaacagaaggatggattagcattaagt
cagtgtatggatgcagtggtggtgtttatcaattcacatctcatgatggatagacgcaac
aaagtagccgttattgccagtcacaccaatgaaagccgtttcttgtaccccaagaagaca
agtgatgcgtttgatgatggagatgatcagagggagcaagatgagatgagctcagatggg
aagtatgaagtctttgcttctatcaatgatacagtcatggaggaactcaagaacttggta
gatgaaaacccgacagtatcacatacggacacgcttctggctggatcactggcgatggca
ttgtgctatattcacagagttgaaaaggaatgtgcagttggtgaaaagataaagtcaaga
atcctagtactcaaagcagctgatgacagtgcatcccagtatatgaactttatgaatgtc
atcttcacagcacaaaaacagaacattcccattgatgcatgtatcctggataaggattcc
agtctgttacagcaggcctgtgacatcacaggaggaaaatacctcaagctcctatcaacg
acagggctactccagtacctactgtgggtatacctaccatctccaagccagagagacagc
ctagtcttaccaccagccatccatgttgactacagggcagcatgtttctgccatcgtata
ctcattgatgtgggatatgtatgctctgtctgtctttccattttctgcacatatagtccc
atctgctcaacatgccatacggccttcaggatcaagggtgctccatctaagatgaagagg
aaaaagaaatcttctgctgtagcttcaataacatga
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