Strongylocentrotus purpuratus (purple sea urchin): 580275
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Entry
580275 CDS
T01019
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spu01001
]
580275
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spu04121
]
580275
Enzymes [BR:
spu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
580275
Protein kinases [BR:
spu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
580275
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
580275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
Med25
zf-B_box
zf-RING_5
zf-RING_UBOX
PHD
zf-C3HC4
zf-RING_2
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
580275
NCBI-ProteinID:
XP_030845499
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MEASTSGQGTSNIHLDLKCKVCEREFSADVQPRMLPCLHTVCAQCLANVTNNTALASGQQ
GILAGSGVVIAKCPICKDDIRSLDDIVEDTWTVPMATAHSMSGGEMLCHNCDANAPATNF
CVDCPGGLCDPCVLLHGKVRFLRDHVIQPRSEENTVSHIVQPPFCTIHPKERLQLYCEKC
VRLTCRDCQLVSHKDHSYQFLTEAAASQRLTMRRFIQELQEKRKNAKVMKNNIQIIYKKM
KDQESIILGRIDELFNGIRSAIDGQATALKTKIQSSTENKCRTLKQQLIEVGTVDSALSQ
CYRVIHNIMTSENDVAALQQNRLVKRRVDLVLRTLLTRQPVTELALQFKQTNVPTRDAFK
SIGSIEGMESKVLFGPPGQQQIRQNQGFPHNMQPGLALNRAALVQQQAQLQAQQQAQQQA
QQQAQQQAHMQQRQLQQQQGINHALFSQRSIGEQLARVNRPTVCAPTIHIPRGLQAQQQQ
QVRPAMQTNILPVLTNPQNTMGIRPSTSTQLTHGLPTSMQPVGPPNVTVTSAMTFGDLTT
AQRKQLMAQVKQNQALNARSPPSVSPSAATAVRNTNSASPSSMGATTVRNTNSASPSSMI
APANDTSGPRILSVKSERRPSKSDSERSSCRFENQSSGSTMIGNGLQDTQPSSSGLEMQQ
GSDKTSPVQSDVQMGGTPERPDQQMGRTPPLTSSATSPDALEDILGIDLPVQVNASDIIG
DIMDEVALETRDSGESADNSDPAPTRESTSEETSGSAAEASGDGAGSVAEASGSGAGSVA
GASGSGAGSVAEASGDGTESVAEASGDGAGPSGSGAGSVSEGSGSGAIAPGEGSSGDPGV
VEASGSGAARAVGSEDVEKHGKEKLSRIRVFLNEMDDSMHEATKESIAAFWKGDVSWEER
DDQGKPRRQVIVGSLYRMTSKKYSREGWPSKLHIKMMHSGMLKPLIDLMRDHQLFFLKCD
QECKELYRKLVAIFKNKDVFGAIRLYSKPEIILLLFYSHKHQKFFIVCPQQREQFSIGFV
KTMEKYFKVQRKGASDKPNPESSTVSTADGDPGTSETAPTSGEKRPIDEDVPSTSQAGTS
RNGEESIEPIPTWKQGYKLRNGMQCSRSDDPNDDWCAVCNNGGNLVCCDRCPRVYHHECH
VPLISEVPEDDDFDCTLCFDVVADEEENVNNENAEKLEGFTAREFKLCQRLLLEMYCLED
SQPFLEPVGPEVTGYLEIIPIPMDLSTIKSKLSLTSPNKYFSPRQMVEDLRVMFTNCYQY
NGETSDLGKIAQHLQRYASRFMKRYLPEYMDSNFVSSANQRHEDRPNKRRKQEHPTPVFH
IR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgagtacaagtggacaaggaacttctaacatccatttggatttaaaatgcaag
gtctgcgagagggagttttcggccgatgtgcagccgcgaatgttgccttgccttcacact
gtttgcgcccagtgcctggcgaacgtgacgaacaacaccgcgctggccagcgggcagcag
ggaatcctggccggatctggagttgttatagccaaatgccccatttgcaaagatgacatc
cgtagtttagacgatatcgttgaagacacgtggacggttcctatggccacagctcatagc
atgtctggaggggagatgctttgccataactgtgatgccaatgcgccggctaccaacttc
tgtgtagattgtccaggagggctctgtgatccctgcgttctgcttcatgggaaggtacga
ttcctgagagaccacgtcatccaaccaaggtccgaagagaacacggtcagccacatcgtc
cagccacctttctgtaccattcaccccaaggaaagacttcaactttactgtgagaagtgc
gttagactgacgtgtcgggattgccagctggtgtcccacaaggatcattcgtaccaattc
ttaacggaagcagcggccagtcagcgcttgaccatgagacgcttcatccaggaactgcag
gagaagcggaagaatgccaaggtgatgaagaataatattcagatcatctacaaaaagatg
aaagaccaggaatccatcattctcggcaggattgatgaactttttaacggaataagaagc
gcaattgatggccaagcaactgctctgaagactaagatccagagcagtaccgaaaacaag
tgccgtaccctgaaacaacagctgattgaagttggtacagtagattcggctctgagtcag
tgctaccgtgtcatccacaatatcatgaccagtgagaacgatgtggcagccctgcagcag
aatcggctggtcaagcgacgagtggacctggtgctgaggacacttctgacacggcaaccc
gtgacggaactggccctccagttcaagcaaacgaacgttccgacgcgggacgcctttaag
tccatcggctctattgaaggcatggagagcaaggtcctcttcggtccgccaggtcagcaa
cagataagacagaaccaagggtttcctcataacatgcagccgggtttggctttaaacaga
gctgcgctggtgcaacagcaagcgcaactgcaagcgcaacagcaggcgcaacagcaggcg
caacagcaggcacaacagcaggcacacatgcaacaacggcaattgcaacagcagcaaggt
atcaatcatgctctctttagccagagatcgataggtgaacaacttgcccgcgtcaaccgg
cctacagtttgtgccccaactatccacatcccacgcggacttcaagctcagcagcagcag
caggtcagaccggccatgcaaaccaatatcttgccagtgttgaccaacccacaaaacaca
atggggattagacctagcacgtccactcagctcacccatgggcttcccacttccatgcag
cccgtaggtcctccgaacgtaaccgtcaccagtgctatgaccttcggagatctgaccaca
gctcagaggaagcagctgatggctcaagtcaagcagaatcaagcgctcaacgcaagatca
cccccttcggtcagtcccagcgctgccacggccgtacgcaacaccaactccgcttcacca
tcctccatgggcgccacgaccgtacgcaacaccaactctgcttccccgtcctctatgatc
gcgccggctaacgacacttcaggtccgaggattctcagtgtcaagagcgaacggagacct
tccaagagtgattctgagcgatcaagctgccgttttgagaatcagagcagtggcagcact
atgatagggaatggtctccaggacactcaaccttcctcttcaggactggagatgcagcag
ggaagtgataagaccagtcctgtccagtcagatgttcagatgggtggaacgcccgaaaga
ccagaccagcagatgggcaggaccccacccctcacgtcttcggccacgagtccggacgct
ttggaagacatcctcggcattgaccttcccgtccaggtgaacgcttcggacatcattggg
gacatcatggatgaggtggcactagagacgagagacagcggagagtccgcggacaactca
gatcctgctcctacgagggagagtacatcggaggaaacatctggatcagcagcagaggcg
tcgggagatggagctggatctgttgcagaggcatctggatctggagcgggatccgttgca
ggggcttctggatctggagcgggatccgttgcagaggcatctggagatggaacagaatct
gttgcagaagcatctggagatggagcagggccttctggatctggagcgggatccgtttca
gagggatcagggtcgggagcaattgcaccaggagaaggcagctccggagatccaggagtc
gtagaagcttcagggtctggagcagccagagcagtaggtagcgaggatgttgagaaacac
ggcaaggaaaagctgagtcgtatccgagtctttctgaatgaaatggatgatagcatgcat
gaggcaaccaaggagagtatagcagctttctggaaaggtgatgtcagctgggaagagcgt
gatgaccaaggcaagcctaggagacaggtgattgtgggaagtctgtatcgaatgacgagc
aagaagtacagtcgggaggggtggcctagcaaactccacatcaaaatgatgcattcagga
atgctcaaacccttgattgatttgatgagggatcatcaactcttctttctcaaatgtgat
caggaatgtaaagaactctatcgaaaactggttgctatcttcaagaataaagatgtgttt
ggtgccattcgactgtactccaagccagagattatcctcttactcttctactctcacaag
catcaaaagttcttcatcgtctgcccccaacagagggagcaattctctattggcttcgtc
aaaaccatggaaaagtatttcaaggtgcagcgcaaaggagcgagtgacaaaccaaaccca
gaatcttccacggtcagtacggcagacggggaccccggcaccagcgaaacagcacccact
tcaggtgagaagcgaccaatcgacgaggacgttccaagtacgagtcaggccgggacgagc
aggaatggcgaggagagcatagagcccataccaacgtggaagcagggttataagcttcgt
aacggcatgcagtgctcgcggtcggacgaccccaacgacgattggtgcgccgtctgtaac
aacggtggtaacctggtgtgctgtgataggtgtccgcgcgtctaccatcatgaatgccat
gtcccgctgattagcgaggtcccagaggatgatgactttgattgtaccttatgctttgac
gtggtagctgatgaggaagaaaacgtcaacaatgaaaacgctgaaaaattagaaggcttc
accgctagagagttcaagctatgtcagaggttacttcttgagatgtattgcctggaggat
tcgcaacccttcttagaacctgtgggtccagaggtgacgggctaccttgaaatcatccca
atccctatggatctatctaccatcaagagcaaactgagcctgacctcaccaaataagtac
ttctcacccagacagatggtcgaggacctacgggtcatgttcaccaactgctaccagtat
aatggggagacatcggacttgggtaagatagcccagcatctacagcgctacgcttcccgc
ttcatgaagcgctacctcccagagtacatggactccaactttgtctcgtccgccaaccag
agacacgaagatcggccgaacaagcgaaggaaacaagagcacccaacaccagtatttcac
atcagataa
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integrated database retrieval system
