Strongylocentrotus purpuratus (purple sea urchin): 580931
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Entry
580931 CDS
T01019
Name
(RefSeq) collagen alpha-5(IV) chain
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
580931
NCBI-ProteinID:
XP_030835813
LinkDB
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Position
Unknown
AA seq
575 aa
AA seq
DB search
MGPKGTKGDLGVQGPQGTMGYPGDPGAKGAHGVPGVAGPPGAKGGNGDPGDLGLMGEAGL
PGQPGLPGLEGITGQIGAPGAPGNPGEKGETGDPGMEGLQGPTGIQGYGMKGEKGDTGDF
GPTGLTGPSGELGPMGPSGEMGTPGLPGAKGERGDVGQDGQMGIEGPEGPSGPQGAMGEP
GPRGEAGLKGERGDQGMAGMPGSPVNITMRGPPGLSEESHINCTFVMKGEPGSPGPSGPR
GDRGDPGLAGTPGLNGFDGMNGQKGEQGLNGTHGMPGVTGPQGPPGETGLMGPQSPPGPP
GFNGTDGMMGLPGIQGEMGLQGLPGEKGASGEYGPQGLKGEPGLEGVPGERGLPGDRAEK
GEIGLQGVQGPEGSKGEVGPAGAIGLPGSPGAQGIQGMKGDKGEYGDQGIQGLSIKGDRG
DMGLAGVAGTKGHKGEEGSFGKPGKKGEPGAGSPGAPGLKGEPGDLGMKGEIGNPGRNGL
HGLAGPTGAPGPQGRYGVAGTKGSRGDMGLPGPQGYKGSPGDYGPNGERGIKGDQGRQGK
RGKRGPKGLPGAPGLDAPCPVGSDGLPLPGCFPAA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggacctaaaggaaccaaaggagatctgggtgtccaaggtcctcaaggtaccatgggt
tacccaggagatccaggcgctaaaggtgcacatggagtaccgggagtagccggtcctcca
ggtgctaaaggtggtaacggagatccaggtgatcttggtctaatgggtgaagctggtcta
cctggtcagcctggtctacccggtctagaagggattacgggacagataggagctcctggt
gctccggggaatccaggagagaaaggagagacaggggatcctggtatggaggggctccag
ggtccaacaggaatccagggatatggaatgaaaggtgaaaagggtgacaccggagatttt
ggaccaacagggctcacaggtccctctggtgagcttggtccaatgggaccttctggtgaa
atgggtacccctggcctacctggtgcaaagggtgaaagaggagatgttggacaagatgga
caaatgggtattgaaggacctgaaggaccatctggacctcaaggagctatgggagaacct
ggtcctaggggagaagctggtcttaagggagagagaggagaccagggcatggctggaatg
cctggttccccagtcaacatcaccatgaggggaccaccaggtctctcggaggagagtcat
atcaactgtacctttgtcatgaaaggagaaccaggatctcctggtccttctggtcctagg
ggtgatagaggagatcctggactagctggaactcctggactcaacggatttgatggaatg
aatgggcagaaaggagaacaaggcctgaatggaacacatggcatgccaggtgtgactggt
ccccaagggcctccaggtgaaacaggtttaatgggtcctcaaagccctcctggtcctcct
ggcttcaatggcactgatggtatgatgggattgccaggtattcaaggtgagatgggtctt
caaggacttccaggtgaaaagggtgcttcaggagaatatggaccacaaggactaaaagga
gaaccaggtctagagggagtaccgggagaaaggggcttacctggagatagagctgaaaaa
ggtgaaattggattacagggcgtccaaggaccagagggttctaagggagaggtgggtcct
gcaggagctattggattaccagggagcccgggagcacaagggatccaggggatgaaagga
gacaagggcgagtatggagatcaaggaatccagggattaagtattaaaggagacagagga
gatatgggattagcaggagtagccggtacgaaggggcataaaggagaagaaggtagcttt
ggcaaacctggaaagaaaggggagccaggagcagggtcacctggtgcaccgggattaaaa
ggagaacctggagaccttggtatgaaaggagaaatcggaaatccaggcagaaatggttta
catggtttagcaggtccaactggggcacctggtcctcaaggaagatatggtgttgcaggg
acgaaaggaagtagaggagatatgggtttacctgggcctcaaggttataaaggaagtcct
ggtgattatggcccaaatggtgaaagaggaataaagggagaccaaggaaggcagggtaag
agagggaaacgaggacccaaaggcttaccgggagcaccagggttagatgcaccttgccct
gtgggttctgatggcttacccctccctggatgcttccctgctgcatag
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