Streptococcus pyogenes M1 GAS (serotype M1): SPy_0038
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Entry
SPy_0038 CDS
T00050
Symbol
ruvB
Name
(GenBank) putative Holliday junction DNA helicase, subunit B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spy
Streptococcus pyogenes M1 GAS (serotype M1)
Pathway
spy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPy_0038 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spy03400
]
SPy_0038 (ruvB)
Enzymes [BR:
spy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPy_0038 (ruvB)
DNA repair and recombination proteins [BR:
spy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPy_0038 (ruvB)
RecFOR pathway proteins
SPy_0038 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
Mg_chelatase
DUF815
Sigma54_activat
AAA_3
nSTAND3
NTPase_1
RNA_helicase
AAA_18
Rad17
MCM
AAA_16
ResIII
IstB_IS21
TsaE
NB-ARC
AAA_17
GGDEF_2
Sigma54_activ_2
AAA_25
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AAK33175
UniProt:
Q9A1Y1
LinkDB
All DBs
Position
53842..54840
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AA seq
332 aa
AA seq
DB search
MARILDNNVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGP
PGLGKTTMAFVIANELGVNLKQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVE
EVLYSAMEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEY
YQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGDGIIT
AQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEMYEP
YLIQKGFLMRTRTGRVATQKAYRHLGYPYQNT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctagaattttagacaataatgtaatgggaaatgaggagttttcggatcggactctt
cgccctcaatatctacacgaatatattggacaagataaagttaaggaacaattcgctatt
tttatagaagcagctaaaagacgtgacgaatctttagaccatgttttattatttggacct
ccaggactgggaaaaacaacaatggcatttgtgattgccaatgaattgggagttaattta
aagcaaacttcaggtcctgccgttgagaaagctggagatttggtagctattttaaatgaa
ttagaaccaggggatattttgtttattgatgaaattcaccgcatgccaatgtctgtcgag
gaagtactatatagtgctatggaagacttctatattgatattatgattggcgctggagat
actagtcgtagtattcatttggatctgcctccatttacattgattggtgctactacacgt
gcaggcatgttatctaatcccctcagagctcgttttggtatcactggtcacatggaatac
tatcaagaaaaggatttgacagagattgtggagcgtacagctactatttttgaaataaaa
atagaccatgaagctgcacggaaattagcttgtcgcagtagaggaacgccccgcattgct
aatcgattactaaaacgagtgcgtgactatgctcaaattattggtgatggcatcataacg
gctcaaataactgatagagctttgactatgttagatgttgaccgcgaaggtctcgattac
attgatcagaaaattttacgaacgatgattgagatgtatcagggagggccagttggtttg
gggacattatctgtgaatattgccgaggagcgtaatacagttgaagagatgtatgaaccc
tacttaattcaaaaaggctttctcatgcgaacacgaacaggtcgtgtagcgacgcaaaag
gcttatcgtcatcttggctatccctatcaaaacacttaa
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