Sphingobium sp. YG1: YGS_C1P2993
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Entry
YGS_C1P2993 CDS
T05858
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00260
Glycine, serine and threonine metabolism
spyg00270
Cysteine and methionine metabolism
spyg00680
Methane metabolism
spyg01100
Metabolic pathways
spyg01110
Biosynthesis of secondary metabolites
spyg01120
Microbial metabolism in diverse environments
spyg01200
Carbon metabolism
spyg01230
Biosynthesis of amino acids
Module
spyg_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
YGS_C1P2993
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YGS_C1P2993
00270 Cysteine and methionine metabolism
YGS_C1P2993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spyg04147
]
YGS_C1P2993
Enzymes [BR:
spyg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
YGS_C1P2993
1.1.1.399 2-oxoglutarate reductase
YGS_C1P2993
Exosome [BR:
spyg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
YGS_C1P2993
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GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
NAD_binding_2
UPF0020
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
BBD01738
UniProt:
A0A2Z6AI77
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All DBs
Position
1:3197260..3198840
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AA seq
526 aa
AA seq
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MPKVLISDKMDPRAAAIFKERGVEVDVITGKTPEELIAIIGDYDGLAIRSSTKVTKEILD
AATNLKVIGRAGIGVDNVDIPYASSKGVIVMNTPFGNSITTAEHAIALMFALARQLPEAN
AQTQQGLWPKNGFMGVEVTGKTLGLIGAGNIGSIVATRALGLKMKVVAFDPFLTPERAIE
MGVEKADLDTLLAKADFITLHTPLTDQTRNILSRENLAKTKKGVRIINCARGGLIDEAAL
KDALDSGQVAGAALDVFQTEPAKESPLFGTPNFICTPHLGASTDEAQVNVALQVADQLSD
YLLDGGITNALNVPSLSAEEAPKLKPYMALAEKLGSLIGQLEGDQISGVAVEVEGHAAEL
NQKPITAAVLAGLMRVYSDTVNMVNAPFLAKERGLDVREVRHDREGDYQTMVRVTVTTES
GERSVAGTLFGHAQPRLVELFGIKVEADLDGTMLYIVNQDAPGFIGRLGSKLGGSDVNIG
TFHLGRRNQGGEAVLLLSVDGTVTEPLRWEICNLTGVKQVKLLRFA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagttcttatcagcgacaagatggacccccgcgccgccgcaatcttcaaggaa
cgcggcgtcgaagtcgacgtcatcaccggcaagacccccgaagaactgatcgccatcatc
ggcgactatgatggcctcgctatccgttcgtccaccaaggtgacaaaggaaatcctggac
gccgcgaccaacctcaaggtcatcggccgcgccggcatcggcgtcgacaatgtcgacatt
ccctatgcctcgtccaagggcgtgatcgtgatgaacacgccgttcggcaactccatcacc
actgccgaacatgccatcgcgctgatgttcgcgctcgcccgccagctgcccgaggcaaac
gctcagacgcagcagggcctgtggcccaagaacggcttcatgggcgtggaagtcaccggc
aagacgctgggcctgatcggcgcgggcaatatcggttcgatcgtcgcgacccgcgcgctg
ggcctcaagatgaaggtcgtcgctttcgatccgttcctgacgccggaacgcgccatcgaa
atgggcgtggaaaaggctgatctggacacgctgctggccaaggccgacttcatcacgctg
cacacgccgctgaccgaccagacccgcaacatcctgagccgcgaaaatctggccaagacc
aagaagggcgtgcgcatcatcaactgcgcgcgtggtggcctgatcgacgaagcggcgctg
aaggacgcgctggattcgggccaggtcgcgggcgccgcgctcgacgtgttccagaccgaa
ccagccaaggaatcgccgctgttcggcacccccaacttcatctgcaccccgcatctgggt
gcatcgaccgacgaagcgcaggtcaatgtcgcgcttcaggtcgccgatcagctgtccgac
tatctgctggacggtggcatcaccaacgcgctgaacgtgcccagcctgtcggccgaggaa
gcgcccaagctcaagccctatatggcgctggcggaaaagctgggcagcctgatcggtcag
ctggaaggcgaccagatcagcggcgtcgccgtcgaagtggaaggccatgccgccgaactg
aaccagaagcccatcaccgccgccgttctcgccggtctgatgcgcgtctattcggacacg
gtgaacatggtcaacgcgcccttcctggcgaaggaacgcggcctggacgtgcgcgaagtg
cgccatgaccgcgaaggcgattatcagaccatggtgcgcgtcaccgtgaccaccgaaagc
ggcgagcgttcggtcgccggcacgctgttcggtcatgctcagccgcgtctggtcgaactg
ttcggcatcaaggtggaagccgatctggacggcacgatgctctacatcgtcaaccaggac
gcgcccggcttcatcggtcgcctggggagcaagctgggcggatcggacgtcaatatcggc
accttccatctgggccgtcgaaaccagggtggcgaagccgtgctgctgctgtcggtggac
ggcaccgtcaccgaaccgctgcgctgggaaatctgcaacctcaccggcgtgaagcaggtg
aagctgctgcgtttcgcgtaa
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