KEGG   Sphingomonas qomolangmaensis: NMP03_05450
Entry
NMP03_05450       CDS       T08594                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
sqo  Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:sqo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sqo03021]
    NMP03_05450 (rpoH)
Transcription machinery [BR:sqo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NMP03_05450 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r3 DUF1870
Other DBs
NCBI-ProteinID: UUL83660
LinkDB
Position
1139807..1140712
AA seq 301 aa
MAIGSNVPATVPALGGEASLNRYLSEIKKFPILAPEREYMLAKRFQEHQDPEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEY
ILRSWSLVKMGTTAAQKKLFFNLRRMKAKLDAFEDGDLRPDDLAKIAKDLGVTQDEVTSM
NRRMAMGGDTSLNVPMREDSESQWQDWLADDQPLQDERVADAQEADVRHTMLVEAMDDLN
DREKHILTERRLTDDPKTLEELSQVYGVSRERVRQIEVRAFEKLQKGMMRLAGEKRLLAF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcaatcggcagcaacgtgcccgcaacggtccccgccctgggcggcgaggccagcctc
aaccgctatctctccgagatcaagaaattccccatcctggcgcccgaacgtgaatatatg
ctcgcgaaacgcttccaggaacatcaggatcccgaggctgcggcgcagctcgtcacttcg
catctgcggctcgtggccaagatcgcgatgggctatcgcggctatggcctgcccgtttcc
gagctgatctcggagggcaatatcgggctgatgcagggcgtgaagaagttcgagcccgat
cgcggtttccgcctcgccacctatgcgatgtggtggatccgcgcgtcgatccaggagtac
atcctgcggtcgtggagcctggtgaagatgggcaccaccgcggcgcagaagaagctgttc
ttcaacctgcggcggatgaaggcgaagctcgacgcgttcgaggacggcgacttgcgccct
gacgacctcgcgaagatcgccaaggatctgggcgtcacgcaggacgaagtgacgagcatg
aaccgccgcatggcgatgggcggcgacacctcgctcaacgtgccaatgcgcgaggattcg
gaaagccagtggcaggattggctcgccgacgaccagccgttgcaggacgagcgcgtcgcc
gatgcgcaggaggccgatgtccgccacacgatgctggtcgaggcgatggacgacctcaac
gatcgtgaaaagcatatcctgaccgagcgccggctgaccgacgaccccaagacgctcgag
gaactgagccaagtctatggcgtatcgcgcgagcgggtccgccagatcgaagttcgtgcg
ttcgagaagctgcaaaaaggcatgatgcgcctggcgggcgagaagcggttgctagcgttc
ggttga

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