Serratia sp. AS13: SerAS13_4189
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Entry
SerAS13_4189 CDS
T02012
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sra
Serratia sp. AS13
Pathway
sra00550
Peptidoglycan biosynthesis
sra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SerAS13_4189
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sra01003
]
SerAS13_4189
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sra01011
]
SerAS13_4189
Enzymes [BR:
sra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SerAS13_4189
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SerAS13_4189
Glycosyltransferases [BR:
sra01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SerAS13_4189
Peptidoglycan biosynthesis and degradation proteins [BR:
sra01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SerAS13_4189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
Rad54_N
Motif
Other DBs
NCBI-ProteinID:
AEG29944
UniProt:
A0A7U3Z5K0
LinkDB
All DBs
Position
complement(4478585..4481092)
Genome browser
AA seq
835 aa
AA seq
DB search
MAGDDREPIGRKGKQPKRTASGKPPRRRRDDDYDDYEEDEQQDDDDEYEDEEESVPRKVK
ATPPRKKRRWLGLLIKLILVVAVLLAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEP
GMPYSKKEMVDLLEGMQYRQVSRMTRPGEFTVQANSIEMLRRPFDFPDGKEGQIHARLDF
QNNRLAKIENMENQRNFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLIATEDR
HFYEHDGISPYSIGRAMLANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKVNEAYMAL
LVDYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVK
GASLYNPWRNPTLALERRNLVLKLLQNQGVIDAELYNMLSARPLGVQPKGGVITPQPAFM
QMVRQELQAKLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARHLNDLEAAMV
IVDRFSGEVRAMVGGANPQFAGFNRAMQARRLVGSLAKPPTYLTALSEPDKYRLNTWLAD
QPLSLKQPNGSVWQPNNYDRKFRGQVMLVDGLAFSLNVPTVNLGMAVGLDQISATLQRLG
IPKAEINPVPSMLLGAIGLTPMEVAQEYQTIASGGNRAPLSAVRSVIAEDGSVLYQSFPQ
AERMVPAQAAYLTLYAMQQGVARGTSRSLSVKFPNYNLAAKTGTTNDLRDSWFAGIDGKE
VAIAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLMLQPPEGINQIGIDSAGNFVCG
EGGRSIPVWTDNPQGLCQASQAAQQQQQQQQQPAGEQKDADGVAGWIKDMFGQGQ
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggctggggatgaccgcgagcccatcgggcgcaaagggaaacaaccaaaacgcaccgcg
tcgggcaaaccgccgcgccgtcgccgagacgacgattatgatgattacgaggaagacgag
cagcaagatgacgatgatgaatatgaagacgaggaggaaagcgtgccgcgtaaggtaaaa
gctactccgccgcgtaaaaaacgccgttggcttggcctgcttatcaaactgattctggtg
gtcgcggttttgttggcgatctacggtgtgtacctggattcccagatccgcagccgcatt
gacggcaaggtctggcaattgccggccgcggtctatggccgcatggtcaacctggaaccg
ggcatgccgtacagcaagaaggaaatggtcgatctgctggaaggtatgcaataccgccag
gttagccgcatgacccggccgggcgagttcaccgtgcaggccaacagcatcgagatgctg
cgccgcccgtttgacttcccggatggtaaagaggggcaaatccatgcccgtctggatttc
cagaacaaccgtctggcgaaaatcgaaaacatggagaaccagcgtaacttcgggttcttc
cgactcgatccgcgcctgattaccatgttgcagtcaccgaacggtgaacagcgtctgttc
gtgccgcgcgccggtttcccggacctgctggtggatacgctgattgcaaccgaagaccgt
catttctacgagcatgacggtatcagcccttactccatcggccgtgcgatgctggcgaac
ctgaccgccgggcgtgcggtgcagggcggcagtaccctgacgcagcaattggtgaagaac
ctgttcctgaccaatgaacgctcgttatggcgtaaagtcaacgaagcctacatggcgctg
ttggtggattaccgttacagcaaggaccgtattcttgagctgtatctgaacgaggtgtat
ctcggccagagcggcagcgaccagatccgcggtttcccgttggccagcctgtattacttc
ggccgcccggtggacgaactgagtctggatcagcaagcattgctggtggggatggtgaaa
ggcgcatccttgtataacccgtggcgcaacccgacgttggcgctggagcgccgcaacctg
gtgctcaagctgttgcaaaatcagggggttatcgacgccgagctgtacaacatgctcagc
gcgcggccgctgggcgtgcagccgaagggtggggtgatcacgccgcaaccggcgtttatg
cagatggtgcgtcaggaactgcaggccaaactgggcgacaaggtgaacgacctgtccggg
gtgaaaatcttcaccacgctggatccggtatctcaggatgcggcggaaaaagcggtcgaa
gacggcattccggcgctgcgtgccgctcgccatcttaacgatctggaagcggcgatggtg
attgtcgatcgcttcagcggtgaggtgcgcgccatggttggcggtgccaacccgcagttc
gccggttttaaccgcgcgatgcaagcgcgccgtctggtcgggtcgctggccaagccgcca
acctatctgactgcgctttccgagccggacaaataccgtctgaatacctggctggcggac
caaccgctgtcgctgaaacagccgaacggcagcgtgtggcagccgaacaactacgaccgc
aaattccgtggacaggtgatgctggtggatggcctggccttctcactcaacgtgccgacg
gtgaacctgggcatggcggtcgggctggatcaaatcagcgctaccttgcagcgtttgggt
attccgaaagcggaaatcaacccggtgccttcgatgctgctgggggcgattggtctgacg
ccgatggaagtggcgcaggaataccaaaccatcgccagcggcggtaaccgtgcgccgctg
tctgcggtgcgttcggtgatcgcggaagacggttcggtgctgtaccagagcttcccgcaa
gcggaacgcatggtgccggctcaggccgcttacctgacgctgtacgccatgcagcagggt
gtagcgcgcgggacctcccgttctctgtcggtgaagttccccaactacaacctggcggcg
aaaaccggtaccaccaacgatctgcgcgacagctggtttgccggcatcgacggtaaagaa
gtggcaatcgcctgggttggccgtgataacaacggtccggccaagctgaccggtgccaac
ggtgcgctgactctgtatcgtcgctatctggaaaaccagacgccgctgccgctgatgctg
cagccgccggaaggcattaaccagattggcatcgactccgccggtaactttgtctgtggc
gagggcgggcgcagcatcccggtgtggaccgataatccgcaagggttgtgtcaggcaagc
caggccgctcagcagcagcaacaacagcaacaacagccggcaggtgagcaaaaagacgct
gacggcgtggccggttggatcaaggatatgttcggccagggccagtaa
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