Sphingomonas radiodurans: LLW23_12920
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Entry
LLW23_12920 CDS
T08717
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
srad
Sphingomonas radiodurans
Pathway
srad03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LLW23_12920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_12920
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LLW23_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
POR
Motif
Other DBs
NCBI-ProteinID:
WBH15714
LinkDB
All DBs
Position
complement(2750156..2751067)
Genome browser
AA seq
303 aa
AA seq
DB search
MAARAYWQGQIRLALVSIPVEIYSATKSGAAVSFKQIHEPTGQPIHYEKVADGVGPVDPD
DIMKGFQIEKGEYVLLDQDEIDSVKLESKKTLELTQFVDANEIDVLYYEKPYFVVPADDL
AEEAFIVLREALKRTRKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDAKPDSELLDLAEALIEKKSSAFDPQIFHDRYVDALKDLIERKREQKGNRKIIDDKG
DGGGRSASNVVDLMAALKKSMEKSGATAPAKATATKAPAKKPAAKKAPAAAAPSKKPAVK
KRA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgtgcatattggcagggacagatccggctcgcgctcgtctcgatcccagta
gagatctattccgccacgaaatcgggcgcagcggtctcgttcaagcagatccacgaaccg
accggccagccgatccattatgagaaggtcgccgacggcgttggcccggtcgatcccgac
gacatcatgaaggggttccagatcgaaaagggcgaatatgtcctgctcgatcaggacgag
atcgattcggtgaagctggaatcgaagaagacgctcgaactcacccagttcgtcgacgcc
aacgagatcgacgtgctctattacgagaagccgtatttcgtcgtccccgccgacgatctc
gccgaggaagccttcatcgtcctgcgcgaggcattgaagcgcacccgaaaggtcggactc
ggtcagctagcgatgcgcggccgcgaatatgtcgtcagcctgaagccatgcgggcgcggg
atggtgctcgaaacactgcgctacgccgacgaggtcaacaaggcgcaaggctatttccgc
gacatccccgatgccaagcctgacagcgagctgctcgatctcgccgaagcgctgatcgag
aagaagagcagcgcgttcgacccgcagatcttccacgatcgctacgtcgatgcgctgaag
gatctgatcgagcgcaagcgcgagcagaagggcaaccgcaagatcatcgacgacaagggt
gacggcggcggccgctccgcctcgaatgtcgtcgacttgatggcggcgctgaagaagtcg
atggaaaagtcgggcgccacggcccctgcgaaggcgaccgcgacgaaggcacccgcgaag
aagccagcggcgaaaaaggctcccgccgcagctgccccgtcgaagaagcccgcagtcaag
aaacgtgcgtaa
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