Streptomyces rapamycinicus: M271_13330
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Entry
M271_13330 CDS
T02907
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
src
Streptomyces rapamycinicus
Pathway
src03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M271_13330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
src03000
]
M271_13330
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_13330
Enzymes [BR:
src01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
M271_13330
Transcription factors [BR:
src03000
]
Prokaryotic type
Helix-turn-helix
AraC family
M271_13330
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M271_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AGP54260
LinkDB
All DBs
Position
complement(3454628..3456103)
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AA seq
491 aa
AA seq
DB search
MHTDTDRCLRAAQAKDARFDGWFFIAVVTTGIYCRPSCPVVGPKPENMRFYPSAAAAQQA
GFRACKRCRPDASPGSPQWNERADLVARAMRLIADGVVDRDGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLIETSALPMADIAFAAGFASVRAFNETVREIFALSPT
ELRQRAGRGPRTSVPGVLTLRLPFRAPLCPDNLFGHLAATAVPGVEEWRDGAYRRTLRLP
YGPGVVTLSPRPDHIACQLSLADLRDLAGAISRCRRLLDLDADPAAVDDLLRTDLQLAPL
VDKAPGRRVPRAVDADEFAVRAVLGQQVSTAAARTHAGRLVTAHGEPVEDPAGGLTHLFP
SVQALAGLDPEQLAMPRTRRATLTGLIGALAEGRVALGVGSDWDEARASLGALPGLGPWT
VEVIAMRALGDPDAFLPTDLGVRRAATELGLPATPGALTRHSTHWRPWRAYAVQYLWATD
AAHAINRLPAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgaccggtgcctccgcgccgcacaggcgaaggacgcccgcttcgac
gggtggttcttcatcgccgtcgtgaccaccgggatctactgccggccgagctgcccggtc
gtcgggcccaagcccgagaacatgcggttctaccccagcgccgcggccgcccagcaggcc
gggttccgggcctgcaagcggtgccgcccggacgccagccccggctcgccgcagtggaac
gagcgggcggatctggtggcccgcgccatgcggctgatcgccgacggcgtggtggaccgg
gacggggtgcccggtctcgccgcccggctgggatacagcacccggcagatcgagcggcag
ctgctcgccgagctcggcgcgggcccgctcgcgctcgccagggcccagcgggcgcagacc
gcgcggctgctgatcgagacgagcgccctgccgatggcggacatcgccttcgcggccggg
ttcgccagtgtccgcgcgttcaacgagaccgtacgcgagatcttcgcgctctccccgacc
gagctgcggcagcgggccggccgggggccgcggaccagcgtgccgggcgtgctcacgctg
cggctgccgttccgggcgccgctgtgccccgacaacctcttcggccacctcgccgccacc
gccgtccccggcgtcgaggagtggcgcgacggcgcgtaccggcgcaccctgcggctgccg
tacgggcccggggtggtcaccctcagcccccggccggaccacatcgcctgccagctctcc
ctcgccgacctgcgcgacctggccggtgcgatcagccgctgccggcggctgctggacctc
gacgcggaccccgccgccgtggacgacctgctccgtacggacctccagctggccccgctg
gtcgacaaggccccggggcggcgggtgccgcgcgcggtggacgcggacgagttcgcggtg
cgcgcggtgctcggccagcaggtgtccacggcggccgcccgcacccacgccgggcgcctg
gtcacggcgcacggcgagcccgtggaggacccggcgggcggcctgacccacctcttcccg
tccgtccaggccctcgccgggctcgaccccgagcagctggccatgccccgcacccgccgc
gccaccctcaccgggctgatcggcgcgctcgccgagggccgggtcgcgctcggcgtcggc
agcgactgggacgaggcccgcgcgagcctcggcgcgctgccggggctcggcccctggacc
gtcgaggtgatcgcgatgcgcgccctcggcgacccggacgccttcctccccaccgacctc
ggagtgcgccgcgccgccaccgaactgggcctgcctgccacgcccggcgccctcacccgc
cactcgacccactggcgcccctggcgcgcctacgccgtccagtacctatgggccacggac
gcggcccacgccatcaaccgcctaccagcggcataa
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