Salpingoeca rosetta: PTSG_01542
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Entry
PTSG_01542 CDS
T04136
Name
(RefSeq) chitin synthase 1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00520
Amino sugar and nucleotide sugar metabolism
sre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
PTSG_01542
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sre01003
]
PTSG_01542
Enzymes [BR:
sre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
PTSG_01542
Glycosyltransferases [BR:
sre01003
]
Polysaccharide
Structural polysaccharide
PTSG_01542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
SAM_2
SAM_1
Glyco_tranf_2_3
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
16078117
NCBI-ProteinID:
XP_004997520
UniProt:
F2U0N1
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MPAAMGPDGLSHYRDDDEDDTIQLQPDAPDWSRVEELKNKLGYREIQSTSCCKPSNLLLG
VLQVLLLLCIFAAAVWAKLSFLSLEHIIYKAHNKGTHPDDDDDDGFPSGDENEIKQRGRL
AYAAVCLAIVVPYAWSLVWKVWRTPLFNDPQHMWPRGVQLAFIVLTALFESAGIAIFTLL
VCPYVPSLLALGMMCLVFCLPRGHVLKGLLRCFRRRPARYQPLIYVHGDPERINTYAADI
DGDDDDLRRGSHEMGRLMSLLGCMVQWVGIASIPILAVILNGHGHKLFIDETLTVAICGP
VSIVLLAVAWWPVLHAKIGLPSIKHERTQRSAVTQMQSENTNAGAANININNNDEEDRQF
GPMHRIKPSSTLRGSVLSLLLRCIFSAIAIYIITIKAYGDLEDDCPAHTTCDFWHNIKNI
SDNSDVLYALLGLLLCSFVAYHGARYSMMMGLQLAGFGIPLSLAPIGTGVLVVLHSLHGF
EEHTHMHVHAKGDWWHFALFVVLASISMWLSNWSYIFARRIPRLGLDETLFYQNAYSAVF
VDHFALISRRSSSRDEAEDDGDAKFVLSTEEVLKESSIYVCTTMYNESETEMEQLLRSVI
NSGLHLSGSCNFESHIFMDGGMQADNEPGNKALQLLRVLHRTIKSILGKKFFENAKAERH
ARVGRRISTPFGMRVELKLTEKFTIHIHLKDPRRVRKGKRWSQVMYMVYLTRYVLDFKKN
GRSDNAYVLATDADINFTAHDVIALLMMMARDRGVGAVCGRTYPLGNGPLVWYQHFDYAV
GHWFQKAAEHVLGTVLCCPGCFSLFRIDALREVVLEYSSHVDQAFDFLTKDMGEDRWLCT
LLVTRGWRLEYCAAAKDRTYCPDSLEDFFKQRRRWIVSTVANMVQILGLGRVAVRRNPSV
SYAYIAYTGLMLVSTVVSPATVLLVMIGGFNYVLGWDLVVVESILFATTFFYLLVCLFGS
QQSQFLLAKILTGVFAIIMCLVFVGLLAQIADDIASATHYNGTSHAPPSPPGPPSPGPGP
GPPTMLDTIARPIAPVNHTDSFNGSDVVSLIIHMVNTSAETLLGGGDSSNRGNNDGHHHH
HHIGVGSGKGNLSMSSVYLLTMVGMFLLAGLMHLGEFTDLVHGVWYLLCLPTGYLFLLIY
ACCNLNDRSWGTRTSDPDGAGPGGSGGQRPTSWWKLLLFGCGLQPKESIIHFIGRVLCCR
SYHQVQDVDVEEEKMALAKSDYVPLTWQLIPDISSTSATEYHVKCLPVSEAISLLRQPTK
DREALESCLREAVLACPTLIDMARERSAAWLSSWNSELLRLESSFVDTILQQPDAARAMA
EDFQLTMDKVTNDFRELQLTDLERARSHAAGLAAQQKLKTVKTVEEWVAELGFQDDEHLI
DRLHENGYENTILLSYLEDRDLRTMGIHQLPSGAVLMTRMKAAAKAAARDRPPYQMADGL
DQWLEALGLGEYWPHFEFFKYRPGDVQNYELMKPLDERRLKEMGIVKLAHVRRLTDALQV
LKKRLRDTDDYKQAVKKTAEDSANVWADNDVGELADTELAFWTGVIEHILSPSNTGLINE
DSLKEKLDSLKNRSVLAMVIINTMWLLFMLVLNSAVAKHLKILGTNPLGVLFILTYGALF
ALQFLTMLVHRFDTFVQYVATISVNNYIDSQRRGSKYTPAPREMTAMSSAASLP
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggcaatggggccggatggtctgtcgcactaccgtgacgatgatgaggatgac
accattcaactccaaccggacgcgccggactggagccgcgtggaagaactgaagaacaag
cttggataccgtgaaatccagtcaacgtcttgctgcaagcccagcaaccttctgcttggc
gtgctgcaagtgctgctgttgctgtgcatcttcgcagcagccgtctgggcaaagctctcc
ttcctgtcactggaacacatcatttacaaagctcacaacaaaggcacccatcccgacgat
gatgacgatgatggtttcccgtcgggcgacgagaacgagatcaaacagcgcggtcgcctc
gcatatgctgccgtctgtctcgccattgtcgtgccctatgcttggtcgctggtgtggaag
gtgtggcgcaccccactcttcaacgatccgcagcacatgtggccgcgcggggtgcagctt
gcctttattgtcctcaccgccctctttgagtcagcaggcatcgccatcttcaccctcctc
gtgtgcccatatgtgccgtcgctgcttgcactgggcatgatgtgccttgtcttctgtctc
ccgcgcggacacgtcctcaagggcctcctccgctgcttccgtcgccgcccagcccgctac
cagccgctcatatatgtgcacggggacccggagcgcataaacacatatgcggctgacatt
gatggcgatgatgacgacctgcgccgcggctcacacgagatgggcaggctcatgtcgctg
ctgggatgcatggttcagtgggttggcattgcgtccatccccatcctggcagttattctg
aacggccacggacacaagctctttattgatgagacgttgacggttgcaatctgcggccct
gtgtcgattgtcctgctagctgttgcgtggtggcccgtgctgcatgcaaagattggcctt
ccctccatcaagcatgagcgcacacagcggagtgctgtgactcagatgcaaagcgagaac
accaacgctggggctgccaacatcaacatcaacaacaacgacgaggaggaccggcagttt
ggtccaatgcaccgcatcaaaccatcgagcacgctgcgcggatctgtgctctcactcctc
ctccgctgtatcttctctgccatcgccatctacatcatcaccatcaaggcgtacggcgac
ctcgaagatgactgtcctgcgcacacaacgtgcgacttttggcacaacatcaagaacatc
tccgacaacagcgacgtcctctatgcgctgctcggcctccttctctgcagcttcgttgcg
taccacggtgcacgatactccatgatgatgggtctgcagctcgccggctttggcatcccg
ctctccctcgccccaatcggcactggcgtgctggttgtgctgcattcgctgcacgggttt
gaggagcacacgcacatgcacgtgcacgccaagggcgattggtggcactttgctctcttt
gtcgtcctcgcgtccatctcaatgtggctgagcaactggtcctacatcttcgcgcgtcgc
atcccgcgtctcggcctcgacgagacgctgttctaccaaaatgcatacagcgcggtgttt
gtggaccactttgcgctcatcagccgccgcagcagcagcagagacgaggccgaagatgac
ggcgatgccaaattcgtcctctccacggaggaggtgctcaaggaaagctcaatctacgtc
tgcaccacaatgtacaacgagagcgagacggaaatggagcagctgctgcggtctgtgatc
aactctggcctccacctctctggctcgtgcaactttgagagccacatcttcatggacggg
ggtatgcaggccgacaacgagcctggcaacaaggcactgcagctgctgcgcgttctccac
cgcaccatcaagtccattctcgggaaaaaattctttgagaatgcgaaagctgagcgtcac
gcgcgcgttggccgtcgcatcagcacgccctttggcatgcgcgttgagctcaagctgacg
gagaagttcaccatccacatccacttgaaggacccacgccgtgtgcgcaagggcaagcgg
tggtcgcaggtgatgtacatggtgtatctcacgcgctacgtgctcgactttaagaagaac
ggccggtccgacaacgcgtatgtgctggcgactgacgccgacatcaactttacggcgcac
gatgtgattgcgctgctgatgatgatggcacgtgatcgtggtgttggcgccgtgtgtggc
cgcacatatcctctcggcaacggtccgctcgtgtggtaccagcactttgactacgctgtt
ggccattggttccagaaggcagccgagcatgtgctgggcacggtgctgtgctgcccgggc
tgcttcagcctcttccgcatcgacgctctgcgcgaagttgtactcgagtactcgtcgcac
gtcgaccaggcattcgatttcctgacaaaggacatgggggaggaccgctggctgtgcacg
ctgctcgtgacacgtggctggcgcctggagtactgcgccgccgcaaaagaccggacgtat
tgtccggacagcctggaggacttcttcaagcagcgtcgacgctggattgtcagcaccgtg
gccaatatggtgcagattcttggcctgggccgcgtggctgttcgccgaaacccctccgtg
tcttacgcctatatcgcatacaccgggctcatgctcgtctcaaccgtcgtcagccctgcg
acggtgctgcttgtgatgattggagggttcaactacgtcctcggctgggatctggtggtg
gttgagtccatcctgtttgccaccacgttcttctacctcctcgtctgcctctttggctcc
cagcagtcgcagttcctcctcgcaaagatcttgacgggcgtgtttgcgatcatcatgtgt
ctcgtctttgtcggtcttcttgcgcaaattgccgatgacattgcatcagcaacacactac
aacggcacgagccacgcaccaccatcgccacccggaccaccatccccaggcccaggtcca
ggcccaccgacaatgctggacaccatcgcccgcccaattgcgcccgtcaaccacacggat
tcgttcaacgggagcgacgtggtgtccctgatcatccacatggtgaacaccagcgccgag
acgctgcttggtggcggcgacagcagcaaccgtggcaacaatgacggccaccaccatcac
caccacattggtgttggttctggcaagggcaacctctccatgtcatcggtgtatctgctg
acgatggttggcatgttcctcctcgctggccttatgcacctcggcgaattcaccgacctt
gtgcacggcgtgtggtacctgctctgcctgccaacgggatacctcttcctcctcatctac
gcctgctgcaacctcaacgatcggtcgtggggtacgcggacgtctgatccggacggcgcc
ggaccgggaggaagcggcggccagcgcccaaccagctggtggaagctgctcctgtttggt
tgcggtcttcagccaaaggaatccatcatccattttatcggccgtgtcctctgctgccgc
tcataccaccaggtgcaagacgttgatgttgaggaggagaagatggcgcttgcaaagagc
gactatgttccgctcacgtggcagctcatccctgacatcagctcaacgtccgcaacagaa
taccacgtgaagtgccttcctgtgagcgaagccatttctctcctccgtcagccaacaaag
gaccgggaagcgctggaatcgtgtttgcgtgaggccgtcctggcgtgcccaacactcatt
gacatggcgcgtgagcggtcggctgcgtggctctcatcgtggaactcggaactgcttcgt
ctggagtcgtcgtttgtggacacaattctgcagcagcccgacgccgcccgcgccatggcc
gaggacttccagctcaccatggacaaggtgacgaacgacttccgcgagctgcagctgacg
gatctcgagcgggcgcgatcccacgccgccggactcgccgcccagcagaagctgaagaca
gtgaagacagtagaggaatgggtggctgagctcggctttcaagatgatgagcacctgatt
gaccgtttgcacgagaacggatacgagaacacaattctgctcagttatctcgaggaccgt
gatctccgcacaatgggaatccatcagctgcccagcggcgctgtgctgatgacgcgcatg
aaggctgcagcgaaagcggcagcacgcgaccgccccccgtaccagatggccgatgggctc
gatcagtggctggaggcgcttgggctgggcgagtactggccccactttgaattcttcaag
taccgccccggtgatgtgcagaactacgaactcatgaaacctttggacgagcgcaggctc
aaggagatgggaattgtgaagctcgcacatgtgcgccggctcacagacgctctgcaggtc
ctcaagaaacgcctccgtgacacagacgactacaagcaggctgtgaagaagacggcagag
gattccgcgaatgtgtgggcggacaacgacgtgggcgagctcgcagatactgaacttgcg
ttttggaccggcgtgattgagcacattctgtcgccgtccaacacaggcctcatcaacgag
gacagcttgaaggagaagctcgacagtctcaagaacagatctgtgcttgcgatggtgatc
atcaacacgatgtggctgctgttcatgctggttctcaacagtgccgttgcgaaacatctc
aagatcctgggaacaaacccgcttggcgtcctcttcatcctcacttacggcgccctgttt
gcgctccagttcctgaccatgctcgtgcaccgcttcgacacgtttgtacagtatgttgcc
acaatctccgtcaacaactacattgactcgcagcgcaggggcagcaagtacacccctgca
ccgcgcgaaatgactgccatgtcctccgccgcctcccttccatag
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integrated database retrieval system
