Salpingoeca rosetta: PTSG_08007
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Entry
PTSG_08007 CDS
T04136
Name
(RefSeq) TATA box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sre
Salpingoeca rosetta
Pathway
sre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PTSG_08007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sre03000
]
PTSG_08007
03021 Transcription machinery [BR:
sre03021
]
PTSG_08007
Transcription factors [BR:
sre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PTSG_08007
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PTSG_08007
RNA polymerase III system
TFIIIB
PTSG_08007
RNA polymerase I system
SL1/TIF-1B
PTSG_08007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
PAC3
Bac_rhamnosid6H
Motif
Other DBs
NCBI-GeneID:
16071582
NCBI-ProteinID:
XP_004991029
UniProt:
F2UHQ8
LinkDB
All DBs
Position
Unknown
AA seq
166 aa
AA seq
DB search
MLKRAGGANSSPNIVNIVATAHLSRTQLKLEEIAEKAKNSEYNPKRYSAIIMRIKEPSAT
ALIFSTGKVVIMGAKSEEAAHAAARQFAQNITKAGTRVSLREIKIHNVVGRVDIGFKLHL
DNLHVEHPAWSTYDPESFPGLTYRMQEPDVVLLIFHSGKIVLTKAK
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacgcgctggtggggcaaactcatcgcccaacattgtcaacattgtggcaacg
gcacacttgagtagaacacagttaaaactggaggagattgcagagaaggcgaaaaactca
gagtacaacccaaagcgatacagcgccatcatcatgcggatcaaagagccctcggcaaca
gccctcatcttctccacgggcaaagtggtcatcatgggtgccaaaagcgaggaagctgct
cacgctgcggcacgacagtttgcacagaacatcacaaaggcgggaactcgggtgtctttg
cgagagattaagatacacaacgtcgtcggccgggtggacattggcttcaagctacatctc
gacaacctgcatgttgagcatccagcgtggtcaacatatgatccagaatcgtttccgggc
ctcacatatcgcatgcaggagccagatgttgttctcctcatcttccacagtgggaagatt
gtgctcacaaaggcaaagtag
DBGET
integrated database retrieval system