KEGG   Salpingoeca rosetta: PTSG_08007
Entry
PTSG_08007        CDS       T04136                                 
Name
(RefSeq) TATA box binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
sre  Salpingoeca rosetta
Pathway
sre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PTSG_08007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sre03000]
    PTSG_08007
   03021 Transcription machinery [BR:sre03021]
    PTSG_08007
Transcription factors [BR:sre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    PTSG_08007
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PTSG_08007
  RNA polymerase III system
    TFIIIB
     PTSG_08007
  RNA polymerase I system
    SL1/TIF-1B
     PTSG_08007
SSDB
Motif
Pfam: TBP DUF3378 PAC3 Bac_rhamnosid6H
Other DBs
NCBI-GeneID: 16071582
NCBI-ProteinID: XP_004991029
UniProt: F2UHQ8
LinkDB
Position
Unknown
AA seq 166 aa
MLKRAGGANSSPNIVNIVATAHLSRTQLKLEEIAEKAKNSEYNPKRYSAIIMRIKEPSAT
ALIFSTGKVVIMGAKSEEAAHAAARQFAQNITKAGTRVSLREIKIHNVVGRVDIGFKLHL
DNLHVEHPAWSTYDPESFPGLTYRMQEPDVVLLIFHSGKIVLTKAK
NT seq 501 nt   +upstreamnt  +downstreamnt
atgttgaaacgcgctggtggggcaaactcatcgcccaacattgtcaacattgtggcaacg
gcacacttgagtagaacacagttaaaactggaggagattgcagagaaggcgaaaaactca
gagtacaacccaaagcgatacagcgccatcatcatgcggatcaaagagccctcggcaaca
gccctcatcttctccacgggcaaagtggtcatcatgggtgccaaaagcgaggaagctgct
cacgctgcggcacgacagtttgcacagaacatcacaaaggcgggaactcgggtgtctttg
cgagagattaagatacacaacgtcgtcggccgggtggacattggcttcaagctacatctc
gacaacctgcatgttgagcatccagcgtggtcaacatatgatccagaatcgtttccgggc
ctcacatatcgcatgcaggagccagatgttgttctcctcatcttccacagtgggaagatt
gtgctcacaaaggcaaagtag

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