Salpingoeca rosetta: PTSG_08410
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Entry
PTSG_08410 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K03252
translation initiation factor 3 subunit C
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sre03012
]
PTSG_08410
Translation factors [BR:
sre03012
]
Eukaryotic type
Initiation factors
eIF-3
PTSG_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
TPR_6
DASH_Ask1
SapB_1
Motif
Other DBs
NCBI-GeneID:
16071217
NCBI-ProteinID:
XP_004990659
UniProt:
F2UJL6
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MSRFYTASTSEESSSEEEEEVPEVTTRSAKQFTRVDSSDEDEQRVVKSKAQKFRDDAAVQ
ASRIRNGMKVADWSSVEDSFSNMCKLLEKSKKQIAEVGVPISCLKIFVELQDEVKEAYRS
RKKLNKQQGTSLNRIHSKLPKFLKTVFNRKPLETSVNEYRENPVEEEESEQEESEDEESE
EEEEDDEKKSASKAPEESEDSDDSYWDTDTSDESDDEEAGERNEQRGFRGWVATDFLKST
TQAKKKQREGKEGSKPKPQAAKEGEGEEGDEGEEKEVTMVVQGKTKEEKPLFEKGEEITY
DKVMNKFKELTSARNKRREKGAHRRALRRLRNISDDHGFGAFPACNILVALITSYFDEDI
SATGYMDIMKWALVHNLLVELIGLLLKNKDIVVSNSTTGNSKSNKSINVDVVRLVERLDD
ELTRSLRNIDQNSPDYIARLSDEVVLYNLIVLTQQYSRTLTADSQCRVRLLRLERIYYKR
TFLAPTPRGPTRMLPSKVEHIMEKYDRQPKPEDIHFPVPSPWVVDNKVEADIEGLVDRLC
KFVYKHCKGRMAVRTALCHVFHLALFDRWTEARDLMLMSRLQDTISQADIPTQILFNRAM
VQLGLCAFRAGNVIQAQAALNEIVQMGRAKELLAQGYKFRHDKSQSQISKEKMRQTPFHM
HINVGLLEAVYYTASMLIEIPAIAQYGTGRSRYMNRNFRHRLEEFCRESYHAPPETTREK
IMSASLAMLQGDWVRCREFICDLGVWDLMPNKPAVLTMLAEKIQHEGLRTFLLANSGYFD
SITLDKLAERFELDMKEVRGIVSKMIFRRELYAFYDPMTAAVVMYRQQPSSLQVAAKKLA
DKVGQLLDANDRLYAARFYSGPREGGQQQDNRRRPYNRYSHGQRGNQRYRGGGQGRQWNN
RPPHTGARLRRTGPQ
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcttctacaccgcatcgacgagtgaggagagctcgtccgaggaagaggaggaa
gtcccagaggtgaccacccgctcagcaaagcagttcacgcgtgtggactcaagcgacgag
gacgagcagcgtgttgtgaagagcaaggcgcagaaattccgtgatgatgctgccgtgcag
gcctcaaggatccgcaacggaatgaaggtcgcagactggtcttctgtggaggactccttc
tcaaacatgtgcaagctcctggagaagagcaagaagcagattgccgaggtcggcgtgccc
atcagctgtctcaagatctttgtcgagctccaagacgaggtcaaggaggcctaccgcagc
cgcaagaagctcaacaagcagcagggcacctccctcaacaggatccactccaagctcccc
aagttcctcaagactgtcttcaaccgcaagccgcttgagacgagcgtgaacgagtaccgc
gagaatcccgtggaggaggaggagtctgagcaggaggagagcgaggatgaggagagcgag
gaggaagaggaggatgacgagaagaagagcgcgtcaaaggccccggaggagagcgaggac
agcgatgacagctactgggacaccgacaccagcgacgaaagcgacgatgaggaggctggc
gagcgcaacgagcagcgcggtttccgcggctgggttgccaccgacttcctcaagtcaacc
acgcaggcgaagaagaagcagcgcgagggcaaggagggcagcaagcccaagccgcaggcc
gccaaggagggtgaaggcgaggagggtgacgagggcgaggagaaggaagtcaccatggtt
gttcagggcaagaccaaggaggagaagcccctctttgagaagggcgaggaaatcacctac
gacaaagtcatgaacaagttcaaggagctgacaagcgctcgcaacaagaggcgcgagaag
ggtgcccatcgccgtgcactccgccgcctccgcaacatttctgatgatcacggctttggc
gcattccccgcgtgcaacatcctggttgccctcatcacatcctactttgatgaggacatc
tccgccaccggctacatggacattatgaaatgggccctggtgcacaacttgcttgttgag
ctcattggtctgctgctgaagaacaaggacattgtcgtgtcaaacagcaccacaggcaac
agcaaatcgaacaagtcgatcaacgtggatgttgtgcgtctggttgagcgcctcgatgat
gagctcacgcgctcccttcgcaacatcgatcagaactccccagactacattgcaagattg
tcggatgaggttgtgttgtacaacctgattgtgctgacccagcagtacagccggaccctg
actgccgactcccagtgccgtgtgcgcctgcttcgtctggagcgcatctactacaagcgc
accttccttgcgccaacacctcgtggccccacccgcatgctgcccagcaaggtggagcac
atcatggagaagtatgacaggcagcccaagccggaggacatccacttccccgtgccgtcc
ccatgggttgttgacaacaaagtcgaggctgacattgagggccttgtggaccgcctgtgc
aagtttgtgtacaagcactgcaagggccgcatggccgtgcgcaccgcgttgtgccacgtg
ttccacttggcgctctttgacaggtggacggaggctcgcgacctcatgctcatgtcccgc
ctgcaagacaccatctctcaggcagacattcccactcagattctgttcaaccgggccatg
gtacagcttggtctgtgtgcgttccgcgccggcaacgtcatccaggcacaggccgccctc
aacgagattgtgcagatgggcagggccaaggagctgttggcacaggggtacaagttcagg
cacgacaagagccagagccaaatctccaaggagaagatgcgccagacaccgttccacatg
cacatcaacgtcggccttctcgaggccgtctactacacagcatccatgctcatcgagatc
ccagcaatcgcacagtacggcactggccgctcgcggtacatgaaccgcaacttccgtcac
cgcctggaggagttttgccgcgagtcgtaccacgcgccgccagagaccacccgcgagaag
atcatgtctgcgtcgctcgccatgctgcagggcgactgggtgcgctgccgcgagttcatc
tgtgacctcggcgtttgggacctcatgcccaacaagccggccgtgctgaccatgctcgcc
gagaagatccagcacgagggcttgcgcaccttcctcctcgcaaactcgggatactttgac
agcatcaccctcgacaagcttgcagagcggtttgagctggacatgaaagaggtgcgcggc
attgtgagcaagatgatcttccgtcgcgagctgtacgccttctacgatcccatgaccgca
gccgttgtcatgtaccgccagcagccatccagcctgcaggttgctgccaagaagctcgca
gacaaggttggccagctgcttgatgccaacgaccggctgtatgctgcccgcttctactct
ggtccgcgcgagggcggccagcaacaggacaaccgccgccgcccctacaaccgctattcg
cacgggcagcgcggcaaccagcgctaccgcggtggcggccagggtcgccagtggaacaac
cgaccgccacacacgggcgcgcgcctgaggcgaaccggcccgcaatag
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