KEGG   Salpingoeca rosetta: PTSG_12784
Entry
PTSG_12784        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K12825  splicing factor 3A subunit 1
Organism
sre  Salpingoeca rosetta
Pathway
sre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PTSG_12784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_12784
Spliceosome [BR:sre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PTSG_12784
 Complex B
    PTSG_12784
 Complex C
   U2 SnRNP specific factors
    PTSG_12784
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD CDK5RAP3
Other DBs
NCBI-GeneID: 16070668
NCBI-ProteinID: XP_004990119
UniProt: F2UKJ4
LinkDB
Position
Unknown
AA seq 670 aa
MGGGGVNCKERESLANLNIAEEEEVEDTTEAVVKEPKPFGFGDEPPPMSVQTLDMLKLTA
LYVAKNGNQFLQELMQREARNYQFDFLRPNHSLYNYFTKLTDQYRQVLMPKREMLSSLAD
YANGFSAPLKRMQHVAAWGKKLAQEQQQRADEEEAERIARAQIDWHDFVVVATIEFGPQD
SDLPPPVDPEELGVRVIEMEQAEQQLKEKLEQQPRARTAPQQEDAKEHKEEKAMDVGGEG
GEEVAMEVEEETAAAEEPAAPPPTTTTAAAAAAGGGDEIKIREYDPKSKTRPAAAAAAGK
EEMLVSPLTGELIPASKMQEHMRISLLDPKWREEKERQEREAAKRKEDWIRSGQQTMDHL
KDIAARRTDIFGSGDIETEIGEKIGAEGAAETGPQQKPATTTTTTTTTTTTKATTNTRPA
PPPISKPPASTAPPAAKPAVPATSAPSTSTAAAPPASRRPPPPSTTAAPPPPRPGMPPMG
GMPPRPRMPFPMGPPRTRPMYPHHPMGRPGFRPPPPFGFRPPPPMGPGMHRPPMQQQPQH
QLVQQAQQLAAAQGGPPTKRSKTDEMVSALKPEDQFLKDHSGDVTVNATVGVDDEAFSLT
SGTQVHVTLPYTAKVSELKAKLQGSLNLPANKQKLLLNGVALANSKTLAFYNITAESNVE
VGLKTRGGKR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggggggtggcggagtaaactgtaaggaaagagagtcgttggccaatctgaacattgct
gaagaggaagaggttgaggacacaacggaggcggtggtgaaggagcccaagccctttggg
tttggggacgagcccccgcccatgtcggtgcaaaccctcgacatgctcaagctcacggcc
ctctacgtcgcaaagaacggcaaccagttcctccaggagctcatgcagcgggaggcacgc
aactaccagtttgactttttgcggccaaaccactccctctacaactacttcaccaagctc
accgaccagtacagacaggtgctgatgccgaaacgtgagatgctgtcgtcgctcgcggac
tatgccaacgggttcagcgcgcccctcaagcgcatgcagcacgtggccgcctggggcaag
aagcttgcacaggagcaacagcagcgcgcagacgaggaggaggcagagcgaattgcgcgg
gcgcagattgactggcatgactttgtcgttgttgccaccattgagtttgggcctcaagac
tctgacctcccgccgcccgtggatcccgaggagcttggcgtgcgggtgattgagatggag
caggccgagcagcagctgaaggagaagttggagcagcagccgcgcgcacgcaccgccccg
cagcaggaggacgcgaaggagcacaaggaggagaaggcgatggatgttggtggtgagggt
ggcgaggaagttgccatggaggttgaggaggagacagcggcggcagaggagccagcagca
cctccgccaaccacgacaaccgccgccgccgccgcggctggcggtggtgacgagatcaag
atcagggagtatgatccaaagagcaagacgcggcccgcggcagcagcggccgccggcaag
gaggagatgcttgtctctccgctcaccggcgagctcattcccgcgtcgaagatgcaggag
cacatgcgcatcagtctcctcgatccaaagtggcgcgaggagaaggagaggcaggagcgt
gaggctgcgaagcggaaggaggattggatccgcagcgggcagcagacgatggaccatcta
aaggacattgctgcccgccgtacagatatcttcggctctggtgacatcgaaacagagatt
ggcgagaagattggcgcggagggagcagcagagacaggcccgcagcagaagccagcgacc
accacaaccaccaccaccacaaccaccacgaccaaagcaacaaccaacaccaggcctgcg
cctccgcccatctcaaagccgccagcatccactgccccgcccgcagccaagcctgctgtc
cccgccacgtccgctccctcgaccagcaccgctgctgcgcccccggcatcgcggcggcca
ccgcctccgtccaccaccgctgcaccgccgccgccgcgaccagggatgccgccaatgggg
ggtatgccccctcggccgcgcatgcccttccccatgggcccgccgcgtacccggcccatg
tacccgcaccacccgatgggtcgccccgggttccgcccgcccccgccgtttgggttccgc
ccgcccccgccaatggggccaggcatgcacaggcctcccatgcagcagcagccgcagcac
cagctcgtgcagcaggcacagcagctggcagcagcccagggtgggccgcccacgaagcgc
agcaagactgacgagatggtcagcgccctcaagcccgaagaccagttcctcaaggaccac
tcgggcgatgtgacggtgaatgcgacggttggtgtggatgacgaggccttcagcctcacc
tccggcacccaagtccacgtcaccctcccttacaccgccaaggtgtctgagctcaaagcc
aagctgcaaggttcgctgaaccttcccgccaacaagcagaagctgctgctgaatggcgtt
gccctggccaactccaagaccctcgccttttacaacatcaccgccgagtcgaacgttgag
gttgggctcaagacgcgtggtggcaagcggtaa

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