Sediminicoccus rosea: LHU95_06395
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Entry
LHU95_06395 CDS
T08103
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
srf
Sediminicoccus rosea
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srf03021
]
LHU95_06395 (rpoH)
Transcription machinery [BR:
srf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LHU95_06395 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_11
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UPY38323
UniProt:
A0A9E7AK52
LinkDB
All DBs
Position
1426701..1427582
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AA seq
293 aa
AA seq
DB search
MASLSIPLAPEGNLSRYLQDIRKFPMLAPEEELNLAKRWRDAGDEAAAHKLVTSHLRLVA
KIAMGYRGYGLPVGELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHSWS
LVKMGTTAAQKKLFFNLRRLKGQIGALEDGDLQPEVVAKIAKTLAVPEQDVVSMNRRLAS
PDNSLNAPVRADSEGEWQDWLVDDAESQESELAEREDMSNRKDMLNGALRTLNERERHIL
IERRLKDEPTTLEELSQQYNISRERVRQIEVRAFEKLQKSMKQQIVDRRLSVG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgagtatcccgcttgccccggaaggcaacctgtcccgctacctgcaggac
atccggaaatttcccatgctcgcccccgaggaagagctgaacctggccaagcgctggcgc
gatgccggcgatgaggcggcggcgcacaagctcgtcacctcgcatctgcgcctcgtggcg
aagatcgcgatgggctatcgcggctatggcctgccggtcggtgaactcatctccgagggc
aatgtcgggatgatgcaggcggtcaagcgcttcgatcccgatcgcggtttccgcttggcg
acctacgccatgtggtggatccgtgccgccatccaggaatacatcctgcacagctggtcc
ctcgtgaagatgggcaccaccgccgcgcagaagaagctgttcttcaacctccgtcgcctc
aaggggcagatcggggcgctggaggatggtgacctgcagccggaagtcgtcgccaagatc
gccaagacgctggccgtgcccgagcaggatgtggtgagcatgaatcgccgcctcgccagc
ccggataacagcctgaacgcccccgtccgcgccgatagcgagggcgagtggcaggattgg
ctggtggatgacgccgagagccaggaaagcgaactcgccgagcgggaggacatgtccaac
cgcaaggacatgctcaatggcgcgctgcgcacgctgaatgagcgtgagcgccatatcttg
atcgagcgccgcctgaaggatgagccgacgacgctcgaagagctcagccagcaatacaac
atcagccgcgagcgcgtgcgtcagatcgaggtccgcgccttcgagaagctgcagaagagc
atgaagcagcagatcgtggaccggcgcctcagcgtcggctga
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