Sediminicoccus rosea: LHU95_13675
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Entry
LHU95_13675 CDS
T08103
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srf
Sediminicoccus rosea
Pathway
srf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHU95_13675 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srf03019
]
LHU95_13675 (recQ)
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_13675 (recQ)
Enzymes [BR:
srf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHU95_13675 (recQ)
Messenger RNA biogenesis [BR:
srf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LHU95_13675 (recQ)
DNA repair and recombination proteins [BR:
srf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LHU95_13675 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UPY35277
UniProt:
A0A9E7AGH9
LinkDB
All DBs
Position
complement(2911480..2913288)
Genome browser
AA seq
602 aa
AA seq
DB search
MRDPAHVLSEVFGHAGFRGRQAEIVEHVMGGGSGLVLMPTGGGKSLCFQVPALCRDGLAI
VVSPLIALMEDQVAALRQQGVAAAALHSELEENERRDVWRGINEGTLKLLYISPERLGMD
GMLERLSQQNIALFAVDEAHCISQWGHHFRPEYRALSFLRSGFPEVPRLALTATADARTV
TDIRAQLGLEDAPVFRASFDRANIHLAAEPRDREREQIRAFLREASDGRGAGIVYCGTRA
RAEQTADWLRADGYDAAPFHAGMPAEDKRDLHRRFARGDAVVMCATIAFGMGIDRPDVRF
VAHLSLPQGPEGWYQEIGRAGRDGLPAKALLLYGAGDISLARHRIQSSPASEEQKRIERM
RLDAMVGIAEAGTCRRRVLLRCFGEDLAQDCGHCDVCAAPPKLTDGTIAAQKLLSAALRT
GSRFGLGHLVDVLQGKLTDKVAQFAHDKLPTFGVGRDVPEGAWRGVARQLVAQGALDIAV
ENHGELVPTEAARAILRGEERVMLREEIIRPRSTRGPARGGRADAPRPAADDPLFAALRE
WRKAEAKAQQVPAYVIFHDATLAEIASRRPVCLDTLRGVPGVGESKLARYGEAVLTALAG
AE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaccccgcccatgtgctgagcgaagtttttggccatgcggggtttcgcggccgg
caggcggagatcgtcgagcatgtgatgggcgggggctccggcctcgtgctgatgcccacg
gggggcggcaagtcgctgtgcttccaggtgccggcactctgccgggacgggctggccatc
gtcgtctcgccgctcatcgcgctgatggaggaccaggtggcggccctgcgccagcaaggt
gtcgccgccgccgcgctgcattccgagctggaggaaaatgagcgccgtgatgtctggcgc
ggcatcaatgagggcacgctgaagctgctctatatcagccccgagcggctgggcatggat
ggcatgctggagcggctttcgcagcagaacatcgcgctcttcgcggtggatgaggcgcat
tgcatcagccaatgggggcatcatttccgccccgaataccgcgcgctgagcttcctgcgc
tcgggctttcccgaagtgccacgcctcgcactcaccgccaccgccgatgcgcgcaccgtc
accgatatccgcgcgcagctggggctggaggatgcgccggtgttccgtgcctccttcgac
cgcgcgaatatccacctggcggccgaaccgcgcgaccgcgagcgggagcaaattcgcgcc
ttcctgcgcgaggcttcggatgggcggggggctggcatcgtctattgcggcacccgcgcg
cgggccgaacagaccgcggactggctgcgcgccgatggctatgacgcggcccccttccat
gcgggcatgcccgccgaggacaagcgggatctgcaccgccgcttcgcccgcggcgatgcc
gtggtgatgtgcgccaccattgcgtttggaatgggtattgaccggccggatgtgcgcttc
gtcgcgcatctctcgctgccgcaggggccggagggctggtatcaggaaatcggccgggcg
gggcgcgacgggctgccggcgaaggccctgctgctctatggcgcgggcgatatctcgctc
gcgcggcatcgcatccagtcgagcccggcttcggaggagcagaagcggatcgagcgcatg
cgcctcgatgccatggtgggcatcgccgaagccggcacctgccgccggcgtgtgctgctg
cgctgctttggcgaggatctggcgcaggattgcgggcattgcgacgtgtgtgccgcgccg
ccgaaactcaccgacggcaccatcgcggcgcagaagctgctctcggccgccttgcgcacc
gggtcgcgctttgggctggggcatctggtggacgtgctgcagggcaagctgaccgacaag
gtcgcgcaattcgcgcatgacaagctgccgaccttcggcgtgggccgggatgtgccggaa
ggcgcctggcgcggtgtggcgcggcaattggtggcgcagggcgcactcgacatcgccgtg
gagaatcacggcgagctggtgccgaccgaagccgcgcgcgccatcctgcggggcgaggag
cgggtgatgctgcgcgaggagatcatccgcccgcgcagcacccgcggcccggcgcggggt
ggccgggccgatgcgccgcgcccggcggccgatgacccgctctttgccgcgctgcgcgaa
tggcgcaaggccgaagccaaggcacagcaggtgccggcctatgtgatcttccatgacgcg
accctggccgagatcgcctcacgccggccggtctgcctcgacacgctgcgcggcgtgccg
ggcgtgggggagagcaagctcgcccgctatggcgaggcggtgctgacggcgctcgcgggc
gccgaatag
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