Sphingomonas rhizophila: H9L12_09295
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Entry
H9L12_09295 CDS
T07014
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
srhi
Sphingomonas rhizophila
Pathway
srhi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H9L12_09295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srhi03400
]
H9L12_09295
DNA repair and recombination proteins [BR:
srhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H9L12_09295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QNN64506
UniProt:
A0A7G9S9I1
LinkDB
All DBs
Position
complement(1807111..1807995)
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AA seq
294 aa
AA seq
DB search
MPARPSWRGQIRLALVAIPVEIYPATKAGKSIAFHQVHEPSGQRVRYEKVVPGIGPVDRD
EILKGYEVSKGEYVLLEPEEIEKVKLESRKTLELTQFVDLGDIDPIYYDKPYYVVPADDL
AEEAFVVLREALRQTKKVGIGQLAMRGQEYVVSLKPCGRGMVLETLRYSDEVNKAQSYFR
DIGNTKPDPDLLDLAQTLIDKKASDFDADEFKNRYIDALRKLIAEKQKKKGKRVIQDDEP
DLPSKGSNVIDLMAALKKSLGDDKKPPAKKAATVKKPATRKTPAKKAAPARKRA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcgaccatcctggcggggacagatacgattggcgctggtcgccattccggtc
gaaatctatccggcgaccaaggcgggcaagtcgatcgctttccaccaggtccacgagccg
tcgggacagcgcgtccgctacgaaaaagtggtgcccggcatcggaccggtcgaccgcgac
gagattctcaagggttatgaagtcagcaagggcgaatatgtcctgctggagcctgaagag
atcgagaaggtgaagctagaaagccgcaagacgctggaactgacccagttcgtcgacctc
ggcgacatcgacccgatctattacgacaagccctattatgtcgtgccggccgacgacctc
gccgaagaggcgttcgtcgtgctgcgagaagcgctgcgccaaacgaagaaggtcggcatc
ggccagctcgcgatgcgggggcaggaatatgtcgtcagcctgaagccttgcgggcgcggc
atggtcttggagacgctgcgctattccgacgaggtcaacaaggcgcagtcttatttccgc
gacatcggcaacaccaagcccgatcccgacctgctcgaccttgcccagacgctgatcgac
aagaaggccagcgatttcgacgccgacgagttcaagaaccgctacatcgatgcgctcagg
aagctgattgcggaaaagcaaaagaaaaagggcaagcgcgtcatccaggacgacgagcct
gacctgccgtcgaagggcagcaacgtcatcgacctgatggcggcactcaagaaaagcctc
ggcgacgacaagaagcctcccgccaagaaggccgccaccgtcaagaagccggccactcga
aagaccccggcgaagaaggcagcgccggcgcgcaagcgggcctga
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