KEGG   Sphingomonas rhizophila: H9L12_09295
Entry
H9L12_09295       CDS       T07014                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
srhi  Sphingomonas rhizophila
Pathway
srhi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:srhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H9L12_09295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srhi03400]
    H9L12_09295
DNA repair and recombination proteins [BR:srhi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H9L12_09295
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QNN64506
UniProt: A0A7G9S9I1
LinkDB
Position
complement(1807111..1807995)
AA seq 294 aa
MPARPSWRGQIRLALVAIPVEIYPATKAGKSIAFHQVHEPSGQRVRYEKVVPGIGPVDRD
EILKGYEVSKGEYVLLEPEEIEKVKLESRKTLELTQFVDLGDIDPIYYDKPYYVVPADDL
AEEAFVVLREALRQTKKVGIGQLAMRGQEYVVSLKPCGRGMVLETLRYSDEVNKAQSYFR
DIGNTKPDPDLLDLAQTLIDKKASDFDADEFKNRYIDALRKLIAEKQKKKGKRVIQDDEP
DLPSKGSNVIDLMAALKKSLGDDKKPPAKKAATVKKPATRKTPAKKAAPARKRA
NT seq 885 nt   +upstreamnt  +downstreamnt
atgccggcgcgaccatcctggcggggacagatacgattggcgctggtcgccattccggtc
gaaatctatccggcgaccaaggcgggcaagtcgatcgctttccaccaggtccacgagccg
tcgggacagcgcgtccgctacgaaaaagtggtgcccggcatcggaccggtcgaccgcgac
gagattctcaagggttatgaagtcagcaagggcgaatatgtcctgctggagcctgaagag
atcgagaaggtgaagctagaaagccgcaagacgctggaactgacccagttcgtcgacctc
ggcgacatcgacccgatctattacgacaagccctattatgtcgtgccggccgacgacctc
gccgaagaggcgttcgtcgtgctgcgagaagcgctgcgccaaacgaagaaggtcggcatc
ggccagctcgcgatgcgggggcaggaatatgtcgtcagcctgaagccttgcgggcgcggc
atggtcttggagacgctgcgctattccgacgaggtcaacaaggcgcagtcttatttccgc
gacatcggcaacaccaagcccgatcccgacctgctcgaccttgcccagacgctgatcgac
aagaaggccagcgatttcgacgccgacgagttcaagaaccgctacatcgatgcgctcagg
aagctgattgcggaaaagcaaaagaaaaagggcaagcgcgtcatccaggacgacgagcct
gacctgccgtcgaagggcagcaacgtcatcgacctgatggcggcactcaagaaaagcctc
ggcgacgacaagaagcctcccgccaagaaggccgccaccgtcaagaagccggccactcga
aagaccccggcgaagaaggcagcgccggcgcgcaagcgggcctga

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