Streptomyces rochei: SRO_4300
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Entry
SRO_4300 CDS
T06265
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
srj
Streptomyces rochei
Pathway
srj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRO_4300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srj03400
]
SRO_4300
Enzymes [BR:
srj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SRO_4300
DNA repair and recombination proteins [BR:
srj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SRO_4300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BBC95476
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All DBs
Position
4748657..4749460
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AA seq
267 aa
AA seq
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MLTVTSVNVNGLRAAAKKGFVPWLAGTEADVVCLQEVRAEPHQLPEEVREPEGWHVVHAP
AAAKGRAGVSLYTRREPDRVRIGFGSDEFDGSGRYVEADLPGVTVASLYLPSGEVGTERQ
DEKIRFMAEFLDHLGALRERAAAEGREVVVCGDWNIAHREADLKNWRGNTKNSGFLPEER
SWLGRVLAPEEGGYVDVVRALHPDVDGPYTWWSYRGRAFDNDSGWRIDYQMATPGLAARA
LKARVERAASHAERWSDHAPVTVTYGA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgctgactgtgacctcggtgaacgtgaatgggctgcgggccgccgccaagaagggcttc
gtgccgtggctggccgggacggaggcggacgtcgtctgcctccaggaggtgcgcgccgaa
ccgcatcagctgcccgaggaggtgcgcgagcccgagggctggcatgtggtgcacgccccg
gcggccgccaaggggcgcgcgggtgtctccctgtacacccggcgcgagcccgaccgggtg
cggatcggcttcgggtccgacgagttcgacggcagcgggcgctatgtcgaggccgacctg
cccggtgtgaccgtcgcctctctctacctcccctccggcgaggtcggcaccgagcggcag
gacgagaagatccgcttcatggcggagttcctcgaccacctcggggcactgcgcgaacgc
gccgccgccgaggggcgcgaggtggtcgtctgcggcgactggaacatcgcccaccgcgag
gccgacctcaagaactggcgcggcaacaccaagaactccggcttcctccccgaggagcgt
tcctggctcggccgggtcctcgcccctgaggagggcggctacgtcgatgtcgtacgggcc
ctgcatccggacgtcgacggcccgtacacctggtggtcgtaccgggggcgggcgttcgac
aacgactccggatggcgcatcgactaccagatggccacgccgggcctcgccgcgcgggcc
ctcaaggcgcgggtcgagagggcggcctcgcacgccgagcgctggtccgaccacgcgccg
gtgaccgtgacctacggcgcttag
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