Skermanella rosea: JL101_001325
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Entry
JL101_001325 CDS
T07666
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sroe
Skermanella rosea
Pathway
sroe00260
Glycine, serine and threonine metabolism
sroe00460
Cyanoamino acid metabolism
sroe00630
Glyoxylate and dicarboxylate metabolism
sroe00670
One carbon pool by folate
sroe00680
Methane metabolism
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01200
Carbon metabolism
sroe01230
Biosynthesis of amino acids
sroe01240
Biosynthesis of cofactors
Module
sroe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL101_001325
09102 Energy metabolism
00680 Methane metabolism
JL101_001325
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JL101_001325
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JL101_001325
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JL101_001325
Enzymes [BR:
sroe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JL101_001325
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UEM04111
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Position
281699..283018
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AA seq
439 aa
AA seq
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MSSLPQSFAPSSGFFGAALAESDPELASAIARELSRQQDQIELIASENIVSAAVLEAQGS
VLTNKYAEGYPGRRYYGGCEFVDVAEQLAIDRAKALFDCAFVNVQPHSGAQANQAVFMAL
LQPGDTILGMSLDAGGHLTHGAAANQSGKWFKAIQYGVRRDDARIDFDQVEALAREHKPK
LIIAGGSAYPRQIDFARFRRIADEVGAFFMVDMAHFAGLVAGGAYPSPLPHAHVVTTTTH
KTLRGPRGGMILSNDPDLGKKINSAVFPGLQGGPLMHVIAGKAAAFGEALRPDFKDYARS
VVENARALAARLIEGGVDIVSGGTDSHVVLVDLRPKNLTGKAAEASLEHAGMTCNKNGVP
FDPQKPMVTSGVRLGTPAATTRGFGVAEFTEVGEMISEVLDGLAASNSGDNTAVEAQVRE
RVRALCRRFPIYQGAQPNL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcttccccaatccttcgcaccctcctccggcttcttcggggccgccctggcc
gagagcgatcccgagctggcctcggcgatcgcgcgcgaattgtcgcgccagcaggaccag
atcgagctgatcgcgtcggagaacatcgtctctgccgccgtgctggaggcccagggctcc
gtcctgacaaacaagtacgcggagggctatcccggccgccgttactatggcggctgcgag
ttcgtcgacgtcgccgagcagctcgccatcgaccgggccaaggccctgttcgactgcgcc
ttcgtcaacgtgcagccccattccggcgcgcaggcgaaccaggcggtcttcatggcgctg
ctccagccgggcgacaccatcctcggcatgtcgctcgatgccggcgggcacctgacccac
ggcgccgcggccaaccagtcgggcaagtggttcaaggccatccagtacggcgtccggcgc
gacgacgcccggatcgacttcgaccaggtcgaggcgctggcgcgcgagcacaagccgaag
ctgatcatcgcgggcggctcggcctatccccgccagatcgatttcgcccgattccgcagg
atcgcggacgaggtcggcgccttcttcatggtcgacatggcccacttcgccggcctggtc
gccggcggcgcctatccgtcgccgctgccccatgcccatgtcgtcaccacgaccacgcac
aaaacgctgcgcggcccgcgcggcggcatgatcctgtccaacgacccggacctgggcaag
aagatcaactcggccgtcttcccaggattgcagggcggcccgctgatgcatgtcattgcc
ggcaaggcggccgcgttcggcgaggcgctgcggcccgacttcaaggactatgcccgctcg
gtggtggagaatgcccgcgcgctggcggcccggctgatcgagggcggcgtcgacatcgtg
tccggcggaaccgacagccacgtggtcctggtcgacctgcggccgaagaacctgaccggc
aaggcggcggaggcgagcctggagcatgccggcatgacctgcaacaagaacggcgtgccg
ttcgacccgcagaagccgatggtcacctccggcgtccggctcggcaccccggcggcgacc
acccgcggtttcggcgtcgcggagttcaccgaggtgggcgagatgatctcggaagtgctc
gacggcctggccgccagcaattcgggcgacaacacggcggtggaggcccaggtgcgcgag
cgcgtccgcgccctatgccggcggttcccgatctaccagggcgcccagcccaacctgtga
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