Skermanella rosea: JL101_015330
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Entry
JL101_015330 CDS
T07666
Name
(GenBank) phytoene/squalene synthase family protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
sroe
Skermanella rosea
Pathway
sroe00906
Carotenoid biosynthesis
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
JL101_015330
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sroe01006
]
JL101_015330
Enzymes [BR:
sroe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
JL101_015330
Prenyltransferases [BR:
sroe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
JL101_015330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
UEM01380
LinkDB
All DBs
Position
complement(3296383..3297432)
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AA seq
349 aa
AA seq
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MQQFWPSRGTRPATAEDFAACRGMLRNASRTFHAASLLLPSRVRQPASALYAFCRLADDA
ADLAGDAHAALDRMRRRLERAYAGRPLDHPVDRSFADVVDRFAIPRALPEALFEGFEWDL
AGRRYADLGELNAYAARVAGTVGAMMAVLMGVRDGDVVARACDLGMAMQLSNIARDVGED
ARAGRLYLPLEWLRDAGIDPDAWLACPVFSPPLGTVVGRLLVVADEFYRQADPGIACLPP
ACRPGIQAARHLYAEIGREVERAGGDSVSRRAVVPARRKALLLARASAAALAGAGEGGGL
RSVEESRFLVEAVAATTVPEAVRDDPVVWLLLLFERLERGQRVALKRQG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagttttggcctagccgcgggacccggccggccacggccgaggatttcgcggcc
tgccgcgggatgctgaggaacgcgtcgcggaccttccatgccgcctcgctcctgctgccg
tcccgggtgcggcagccggcctccgcgctctacgccttctgccggctggccgacgacgcg
gccgatcttgccggggacgcccacgccgcgctggaccggatgcggcggcggctggagcgt
gcctatgccggccgtccgctggaccatccggtggacaggtccttcgccgatgtggtggac
cgcttcgcgattccccgcgccctgccggaagcgctgttcgaagggttcgagtgggatctg
gccggccggcgttacgccgatctcggggaactgaacgcctatgccgcccgcgtcgccggg
accgtcggcgccatgatggccgtgctgatgggcgtgcgcgacggcgacgtggtggcgcgc
gcctgcgacctgggcatggcgatgcagctttccaacatcgcccgcgacgtcggcgaggac
gcgcgggccggtcgcctctacctgccgctggagtggctgcgggacgcgggcatcgacccc
gacgcctggctggcctgcccggtgttcagcccgccgctgggcaccgtggtcgggcggctg
ctggtcgtggccgacgagttctaccgccaggccgatcccggcatcgcctgcctgccgccc
gcgtgccgccccggcatccaggcggcccgccacctctatgccgagatcggccgcgaggta
gaacgggccggcggggactcggtgtcgcgccgggccgtcgtcccggcgcgccgcaaggcg
ttgctgctggcccgggcatcggccgccgccctggctggtgctggagagggcggtgggctc
cggagcgtcgaggagtcccgcttcctggtcgaggccgtggccgccacgacggtgcccgag
gcggtacgggacgacccggtggtgtggctgctcctcctgttcgaacggctggagcgcggc
cagcgcgtggcgctgaagcgccagggctga
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