Skermanella rosea: JL101_017890
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Entry
JL101_017890 CDS
T07666
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sroe03009
]
JL101_017890
Enzymes [BR:
sroe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
JL101_017890
Ribosome biogenesis [BR:
sroe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JL101_017890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UEM01866
LinkDB
All DBs
Position
3820663..3821724
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AA seq
353 aa
AA seq
DB search
MTADEEDEMEDPDGEADPEGEPFSFTAAEADRGERLDKLLACGLDGLSRTRIRSLIDQGR
VSSLGRTIADPSLRVKPGQTFDVLVPEPEPALPVPQEIPLAVVYEDDDLLVIDKPAGMVV
HPAAGNADGTLVNALLWHCGDRLSGIGGVRRPGIVHRLDKETSGLMVVAKNDLAHGGLAA
QFADRSLSRTYHAVVAGVPSPARGEITGDIGRSPADRKKMAVVSGGKPALTRYRVLKAFG
TWASLVECTLATGRTHQIRVHMTHVGHPLIGDPVYGVRKTGIKGASKGIGPGAASAKARG
LPEPVRDAVVALGRQALHAVALRFNHPRDARPMQFESELPLDIQRLIGSLESI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgacgaagaggacgagatggaagatccggacggcgaagccgatccggagggc
gagccgttcagcttcaccgcggccgaggcggaccggggcgaacggctggacaagcttctg
gcctgcgggctcgacggcctgtcgcgcacccgtatccgctcgctgatcgaccagggtcgg
gtttcgagtctcggccggacgatagccgacccgtcattgcgggtcaaacccggccagacc
ttcgacgtcttggtgcctgagccggaaccggcgctccccgttccccaggaaatcccgctc
gccgtcgtctacgaggacgacgacctgctggtgatcgacaagcccgccggcatggtggtc
catccggccgcgggcaacgccgacgggacgctggtcaacgccctgctctggcactgcggc
gaccggctgtccggcatcggcggcgtgcgccggcccggcatcgtccaccggctcgacaag
gagaccagcgggctgatggtggtggcgaagaacgacctggcgcatggcggcctcgccgcc
cagttcgccgaccggtcgctcagccgcacctaccacgcggtcgtggccggagtcccctcc
cccgcccggggcgagatcaccggcgacatcgggcgcagcccggcggaccgcaagaagatg
gccgtcgtctccggcggcaagcccgcgctgacccgctaccgcgtgctgaaggcgttcgga
acctgggcgtcgctcgtggaatgcacgctggcgacggggcggacacatcaaataagggtg
catatgacccatgtcggacatcccttgatcggcgatcctgtctatggtgtccgtaaaact
ggtatcaagggcgcatccaagggaatcggacccggggccgcgtccgccaaggcccgcgga
ctcccggaaccggttcgggacgcggttgttgcactgggaagacaggccctgcacgccgtg
gcgctgcggttcaaccacccgcgcgacgcccggccgatgcagttcgaatccgaattacct
ttggacatccaaaggttaataggcagcttggaatcgatttaa
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