Skermanella rosea: JL101_017895
Help
Entry
JL101_017895 CDS
T07666
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroe03021
]
JL101_017895 (rpoH)
Transcription machinery [BR:
sroe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL101_017895 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_11
DUF4250
Motif
Other DBs
NCBI-ProteinID:
UEM01867
LinkDB
All DBs
Position
3821858..3822742
Genome browser
AA seq
294 aa
AA seq
DB search
MSNTPSVPVISSEGNLARYLQEIRKFPMLEPQQEFMLAKSWREHGDTEAAHKLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIDEGDLSPEHVTQIATKLDVPEQDVVNMNRRL
ASPDHSLNAPLRADSEGEWQDWLVDEQDTQEIHLAEREELSKRRALLKSAMTNLNERERH
ILTERRLRDEPTTLEDLSQHYGISRERVRQIEVRAFEKLQKNIKNAAIEQRLAQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacactcccagcgttccggtgatcagttccgaaggcaatctggcccgttacctt
caggaaatccgcaagttccccatgctcgagccgcagcaggagttcatgctcgccaagtcc
tggcgcgagcacggcgacaccgaggccgcgcacaagctggtgaccagccatctgcggctg
gtggcgaagatcgccatgggctaccggggttacggcctgccgctgtcggagctgatctcg
gaaggcaatgtcggcatgatgcaggcggtcaagcggttcgacccggaccgcggcttccgg
ctggcgacctacgccatgtggtggatccgggccgccatccaggaatacatcctgcacagc
tggtcgctggtcaagatgggcaccacggccgcgcagaagaagctgttcttcaacctgcgc
aagctgaagggccagatgcaggcgatcgacgagggcgacctgtcgccggagcacgtgacg
cagatcgcgaccaagctcgacgtgccggaacaggacgtggtcaacatgaaccgccgcctg
gccagccccgaccattcgctgaacgcgccgctgcgcgccgacagcgagggcgaatggcag
gactggctggtcgacgagcaggacacccaggagatccacctggccgagcgggaggagctg
agcaagcgccgcgccctgctgaagagcgccatgaccaacctgaacgagcgcgagcggcat
atcctgaccgagcggcgcctgcgcgacgagccgaccacgctggaggacctgtcgcagcat
tacggcatcagccgcgagcgggtgcgccagatcgaggtccgggcgttcgagaagctccag
aagaacatcaagaacgcggcgatcgagcagcggctggcccagtag
DBGET
integrated database retrieval system
