Serratia plymuthica AS9: SerAS9_3281
Help
Entry
SerAS9_3281 CDS
T01503
Name
(GenBank) ABC-type transporter, periplasmic subunit
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
srr
Serratia plymuthica AS9
Pathway
srr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SerAS9_3281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srr02000
]
SerAS9_3281
Transporters [BR:
srr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SerAS9_3281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Emaravirus_P4
Motif
Other DBs
NCBI-ProteinID:
AEF46393
LinkDB
All DBs
Position
complement(3496463..3498088)
Genome browser
AA seq
541 aa
AA seq
DB search
MFKFSFNTLTGGITVALGLAASVHPALAAVQGGTLVYLEQQAHTNLYPPSGGFYPNGGIL
NQITDKLTYQNPKTLEIEPWIAESWSSNADKTEYTFKLRPGVTFSDGTPLDANAVAKNFD
TYGLGNKDKRLPVSEVINNYDRSEVIDPLTVKFYFKHSSPGFLQGTATIGSGLVSLSTLN
RSYDELGDARHIIGSGPFVVSGETLGREVDLSVRKDYHWGPAKLAQQGRANLDGIKVIVI
GEDSVRIGALQAGQADFIRQIQAYDEKQTQDQGFTIYAAPTRGVNDSVSFRPDNPLVSDL
RVRQALLHATDSKQIVETLFSANYPQAKSVIASSAAGFVDLSDKLKFDPQLANRLLDEAG
WKKGSDGLREKEGKKLLLNVYESLPQPQNKAVLQLVSQQWGKVGARLNILAGDAGSRVAD
NLDPQKTPATVVEVGRADPDVIKSQFYPTNRDALLQKGGSGKNSQFSDDKLNALLLGIAS
EVDAQKRLQIAGEAQNYLLDQAYVIPFFEEPQVFAGAPYLKGVSFEAVGRPSFYGAWLEK
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagttctctttcaacacattaaccggcgggataacagtggcattggggctggcg
gcgagtgttcatccggcgctggcggcggtgcagggcggcacgctggtctacctggagcag
caggcgcacaccaacctttacccgccctccggcggtttctaccccaacggcggcatcctc
aaccagatcaccgacaaactgacctatcagaacccgaaaacgctggagattgagccgtgg
atcgccgaatcctggagcagcaacgccgacaaaaccgaatacaccttcaagctgcgcccg
ggcgtcaccttctccgatggcacgccgctggacgccaacgcggtggcgaagaattttgat
acctacggcctgggcaacaaagacaaacgcctgccggtgtcggaggtgatcaacaactat
gaccgcagcgaagtgatcgacccgctgaccgtcaaattttacttcaagcattcatcgccg
ggcttcctgcagggcaccgccaccataggttcggggctggtgtccctcagcaccctgaac
cgcagttacgacgaactcggcgacgcgcgccatatcatcggctccggcccgttcgtggtc
agcggcgaaacgctggggcgcgaagtggacctcagcgtacgcaaggactaccactggggg
ccggccaaactggcgcagcaggggcgcgccaatctggacggcatcaaggtgatcgtcatc
ggcgaagacagcgtgcgtattggggcgttgcaggccggtcaggcggactttattcgccaa
attcaggcttatgacgagaagcagactcaggatcaggggttcacgatttacgccgccccg
acgcgtggcgttaacgacagcgtctccttccggccggacaacccgctggtgagcgacctg
cgggtgcgtcaggcgctgctgcatgccaccgacagcaagcaaatcgtcgagacgctgttc
tcggccaattacccgcaggccaaatcggtcatcgcctcgtccgccgccggttttgtcgat
ctgtccgacaaactgaagttcgatccgcagttagccaaccgtctgctggatgaagccggc
tggaaaaagggcagcgacggcctgcgcgagaaagagggtaaaaaactgctgctgaatgtg
tatgaatccctgccgcagccccagaacaaggcggtgctgcagttggtttcgcagcagtgg
ggcaaggtgggtgcacgcctgaatatcctggccggtgacgccggcagccgggtggcggat
aacctcgatccgcagaaaaccccggcgacggtggtggaagtgggccgcgccgatcctgat
gtgattaaaagccagttctacccgaccaaccgcgatgcgttgttgcaaaagggcggcagc
ggcaagaacagccaattcagcgatgacaagctgaacgcgctgctgctgggcatcgcctcc
gaggtcgatgcgcaaaaacgcctgcaaatcgccggcgaggcgcaaaactacctgctcgat
caggcctatgtgatcccgttctttgaggagccgcaggtgtttgccggcgcgccttatctg
aagggcgtcagttttgaagcggtcggccgcccgagtttctatggcgcctggttagagaaa
cattaa
DBGET
integrated database retrieval system
