Streptomyces rutgersensis: F0345_14225
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Entry
F0345_14225 CDS
T08623
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0345_14225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srug03019
]
F0345_14225
Enzymes [BR:
srug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
F0345_14225
Messenger RNA biogenesis [BR:
srug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
F0345_14225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
TPR_11
HEPN_AbiA_CTD
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
QNE82133
UniProt:
A0A6A0BLX7
LinkDB
All DBs
Position
3453323..3454789
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AA seq
488 aa
AA seq
DB search
MPNANEDKPRELSQAQRRAVSELLRVSPAADDLARRFEEAGHSLALVGGSVRDALLGRLG
NDLDFTTDARPEQVLRIVRPWADAVWEVGIAFGTVGCQKRAVVAGEELTFEIEITTYRSE
AYDRTSRKPEVSYGDAIEDDLVRRDFTVNAMAVALPQKAFVDPYGGLEDLAALVLRTPGT
PEASFSDDPLRMMRAARFAAQLDFDVAPEVVAAMTEMAERITIVSAERVRDELNKLLLAA
HPRKGLTLLVDTGLAAHVLPELPALRLESDEHHRHKDVYEHSLTVLEQAIDLEEDGPDLT
LRLAALLHDIGKPRTRRFEKDGRVSFHHHEVVGAKMVKKRMTALKYANELVKDVSRLVEL
HLRFHGYGTGEWTDSAVRRYVRDAGPQLSRLHKLTRSDCTTRNKRKASALSRAYDGLEER
IAQLQEQEELDAIRPDLDGNQIMRILGVGPGPVIGKAYAFLLDQRLEHGPMGEEAAAAAL
KEWWAAQG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagacaagccccgtgaactgagccaggcgcagcgccgcgctgtg
agcgaactgctgcgcgtctcccccgccgcggacgatctggcccgccgcttcgaggaggcc
ggacactccctcgccctggtgggtggctcggtccgggacgccttgctcgggcggctgggc
aacgacctggacttcacgaccgacgcccggccggagcaggtcctgaggatcgtcaggccc
tgggcggacgccgtctgggaggtggggatcgccttcgggaccgtcggctgccagaagcgg
gccgtcgtggcgggcgaggagctcaccttcgagatcgagatcaccacgtaccgctcggag
gcgtacgaccggacctcgcgcaagcccgaggtctcctacggcgacgcgatcgaggacgac
ctggtccgccgcgacttcacggtcaacgcgatggcggtggccctgccgcagaaggcgttc
gtcgacccgtacgggggtctggaggatctggcggccctggtgctgaggacgcccgggacg
cccgaggcgtccttctccgacgatccgctgcggatgatgcgcgcggcgcggttcgccgcg
cagctcgacttcgacgtggctccggaggtggtcgccgcgatgacggagatggccgagcgg
atcaccatcgtctccgccgagcgggtccgcgacgaactgaacaagctgctccttgccgcc
catcctcgcaagggcctcaccctgctcgtcgacaccggcctcgccgcgcacgtactcccg
gagctgccggccctgcgcctggagagtgacgagcatcaccgtcacaaggatgtctacgag
cacagcctgaccgtcctggagcaggccatcgacctggaggaggacggcccggacctcacc
ctccggctcgccgcgctcctccacgacatcggcaagccgcgcacccggcgcttcgagaag
gacggccgggtctccttccaccaccacgaggtggtcggcgccaagatggtgaagaagcgc
atgacggcgctcaagtacgccaacgagctggtcaaggacgtctcgcggctggtcgagctg
catctgcggttccacggctacggcacgggcgagtggaccgactcagcggtgcgccggtat
gtccgggacgccgggccccagctgtcccgtctgcacaagctgacccgctcggactgcacc
acccggaacaagcgcaaggcgtcggcgctctcacgggcctacgacggcctggaggagcgc
atcgcccagctccaggagcaggaggaactggatgccatccggccggatctggacggcaac
cagatcatgcggattctcggggtgggccccgggccggtgatcggcaaggcgtacgccttc
ctgctcgaccagcggctggagcacggccccatgggcgaagaggccgctgcggccgcgctc
aaggagtggtgggccgcgcagggctga
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