Sinocyclocheilus rhinocerous: 107707670
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Entry
107707670 CDS
T04916
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04140
Autophagy - animal
srx04148
Efferocytosis
srx05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107707670
04148 Efferocytosis
107707670
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107707670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107707670
Membrane trafficking [BR:
srx04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107707670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
Vps39_2
CNH
Clathrin
WD40_like
Radical_SAM_C
CYP38_PsbQ-like
zf-FCS
Motif
Other DBs
NCBI-GeneID:
107707670
NCBI-ProteinID:
XP_016367235
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLATWDDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLFVVSQYKILISLLENNIHVHDLLTFQQITVVSKARGATLFACDLQQSSSGE
ARLRMCVAVKRKILLYYWKDREFHELQGDFAAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGSVKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTLEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPISI
ASQIRQLLQDKQFELALQLAKMKDDSDADKRQQIHHIQNLFAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSDYCKQLHYPNPLPVMSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPFTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG
IIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKEGFQELAIPYLEHIIHLWD
ETRPEFHNVLIQLYLEKVQGLMKVYLNSLPEGVPAVAAGKEAGELGEYRNKLLSFLEVSS
SYEPERLVSDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHGHYDPSTN
GNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALKVLQLHHSKLNTTKAINLLP
ANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCVITDEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRSVCPEE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcatacgagccagttcctatcctggagaaattacccctccagattgactgt
ctggcgacctgggatgattggctccttgtgggtaccaaaccaggccatctccttctgtac
aggatcaagaaagatgcaggtacaaacaggtttgaagttacattagagaaatccaataag
aacttctcaaagaagattcagcagctttttgtggtgtcacagtacaagattttgattagt
ttgttggaaaataacatccacgttcacgacctgctcacgttccagcagataactgttgtg
tccaaagccagaggagccacactgtttgcctgtgacctgcagcagtctagctcaggtgag
gccagactgcgcatgtgtgttgcagtcaagaggaaaattctgctgtattactggaaggac
agagaattccatgaattacagggggatttcgccgctccagacattcccaagtccatggct
tggtgtgagaactccatatgtgtgggtttcaaacgagactactatctgatccggatggac
ggacgtggctcagtcaaagaactgttccccacagggaaacagctggaaccattggtggcc
ccgttggctgatgggaaggtcgcagtgggtcaggatgacctcacggttgttttgaacgaa
gaaggcgtctgcactcagaaatgtgcccttaactggacggacattcctgttgcaatggag
caccagccaccgtacatcatcgcagtgctgccacgctatgtggagatccgcacgcttgag
cccagactgctggtgcagagcgtagaactgcagagaccgcgcttcatcacctccgctgga
tcaaatgttgtgtatgtcgctagcaatcactttgtttggcgtctggtgcccatctctata
gccagccagatacgacagctgctacaggacaaacagtttgaactggcacttcagctagcg
aaaatgaaggatgattcagatgcagataagagacaacagatccatcacattcagaacctg
tttgccttcaacttgttctgtcagaaacgctttgacgactccatgcaggtgtttgcaaag
ttaggcacagatcccactcatgttattggactgtatccagacctgctcccctctgactac
tgcaaacagctgcactaccccaaccctctgcctgtgatgtctggagccgagctggagaaa
gcccacctggccctcatagactacctgacacagaaacgcagtcatttagtgaagcagctg
aatgactcggaccccttcaccacctcccctctcatggaggggacccccaccatcaagagc
cgcaagaaactccttcagatcatcgacaccactctgctgaaatgttacctccacaccaat
gtagccttagtgtcgcctctcctgcggctggagaacaaccactgtcacatagaggagagc
gagtatgtgctgaagaaagcccacaaatacagcgaactcatcatcctctatgagaaaaaa
ggccttcatcagaaagctctgcaggttctgctggatcagtccaccaaagccaactctcct
ctgaaggggcatgagaggactgtacagtatcttcagagactgggtgtggagaacctgggc
atcatatttgagttttcgccgtgggttctgaagatttgtccagaggatggactaaagatc
ttcactgaggacctgacggaggtggagactctgcccagggataaggtgttgaacttcctg
aaggagggcttccaggagctggccatcccgtacctggagcacatcattcacctgtgggac
gagacacggcccgagttccacaatgttctgatccagctctacctggagaaggtgcaaggc
ctcatgaaagtgtacctcaactcactgcctgaaggtgttccagctgtagctgcaggaaag
gaggcgggagagctgggagagtacaggaacaagcttctgtcgtttctggaagtgtccagc
agctatgagccagagcgactcgtcagtgatttcccatttgatggtctgttggaggagagg
gctcttctcctgggtcgtatggggaaacatgagcaggctcttttcatctacgttcacatt
ctcaaagacacgcgtatggctgaagagtactgccatggtcattatgatccatcaacaaat
ggcaataaagatgtgtatctgtccctgctgcgcatgtatctgtctcctccggacgtgcac
ttcctcgggcccataaagatggagttatgtgagccacaggcaaacctccaggcggccctg
aaagttcttcagctccaccacagcaaactgaacaccaccaaagccataaacctgctgcca
gccaacacacagatccgagagatccaggtctttctggagagtgtgctggaggagaaggct
gggaggaagcgctttgaccaggtcctgaagagcctcctacaggccgagttcctgcgggtg
caggaggaacgtatctttcaccagcaggtgaagtgtgtcatcacagatgagaaaacctgc
agagtgtgcaagaagaagatcggaaacagtgcctttgccaggtatcctaacggtgtggtg
gttcactacttctgctgtaaagatcgcagcgtgtgtccagaggagtag
DBGET
integrated database retrieval system
