Sinocyclocheilus rhinocerous: 107725010
Help
Entry
107725010 CDS
T04916
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107725010
03036 Chromosome and associated proteins [BR:
srx03036
]
107725010
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107725010
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Pre-60S particles
Helicases
107725010
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107725010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
107725010
NCBI-ProteinID:
XP_016389610
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSICRTASEMPSKVLPEAGPSTLMEEVESGLLLLKKKKKKLKEQQLMAGECDSPAPRKRK
AEKMPTEASDVNGNTDTKQIKLKKKKKANVEDVMSGGEPDKPSPSAVVDSDSDREKETPE
QKEGAFSNFRISQNTIKLLQARGVSYLFDIQVKTFNSVYDGKDVIGQARTGTGKTFSFAV
PLVEKLQAAADDRRRGRAPTVLVLTPTRELAIQVSKDFKDVTKKLSVTCFYGGSSYNPQL
EAIRNGIDVLVGTPGRIRDHLQNNKLDLSQIKHVVLDEVDQMLDMGFAEQVEEILSVSYK
KDAEEKPQTLLFSATCPAWVYEVAKKYMRSQYIHVDLIGKKTQKAATTVEHLAIACHWSQ
RASVIGDVVQVYSGSHGRTIVFCETKREATELSMNTSIKQSAQTLHGDIPQKQREITLKG
FRSGTFEVLVATNVAARGLDIPELDLVIQCSPPNDVESYIHRSGRTGRAGRTGICICFYQ
RKEESQLKFVEQKAGITFKRVGVPTANDIIQSSSKDAVRFLDSVPAVAVGYFREAAQELI
EQRGAVEALAAALAHISGATSLEQRSLINSDTGFTTMMMSCSQEMHNIGYAWRGLKEQLG
EEVDEHIKRMTFLKGKKGVCFDVPASKAKEMQDRWQDGRRWQLSVATELPEMEQSMRPSS
ERSSGGFGRGRRSFGFKGNNSSGGRRGRGGAQKRSFSQAFDY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctgccgcacagcatctgagatgccgtctaaggtcctgcctgaagccggtccc
agcacactcatggaggaggtggagagcggcctgctgctgctgaagaaaaagaaaaagaag
ctgaaagaacaacagctgatggcaggagagtgtgattcaccggctcctagaaagaggaag
gctgagaagatgcccaccgaggcttcagacgtgaacggaaacacggacaccaagcagatc
aagttgaaaaagaagaaaaaggcaaacgtggaggacgtgatgagcggcggagagcctgat
aaaccgtccccgtcggctgtggtggactccgacagcgaccgggagaaagaaactccggag
cagaaagaaggagccttttccaacttcaggatctcccagaacaccatcaaactgctgcag
gcccgtggtgtttcatacctctttgacatccaagtcaagacctttaactcggtgtatgat
gggaaggatgtcatcggtcaggcgagaaccggcacggggaagaccttctcgtttgctgtt
cctctggtggagaagctgcaggcagcagcggacgacaggagaagaggccgagccccgacg
gtgctggttctgacaccgactcgtgagctcgccattcaggtgtccaaagacttcaaagac
gtcaccaagaagctgtctgttacgtgtttctacggaggaagctcatacaacccacaactg
gaagcaatccgcaatggcatcgacgtactggtgggaacgccgggtcgaatccgagaccat
ctgcagaataacaagctggatctgtctcagatcaagcacgtggtgctggacgaggtggac
cagatgctggacatgggcttcgcagagcaggtggaggagatcctctctgtgtcctataag
aaggatgcagaggagaaaccgcagacgctgctgttctcagcgacgtgtcctgcttgggtt
tatgaggtggccaagaaatacatgcgctctcagtacatccatgtggatctcatcgggaaa
aagacccagaaagccgccaccacagtcgagcacctggcgatcgcgtgtcactggtctcag
cgggcgtctgtcatcggtgatgtggttcaggtgtacagcggcagccacggccggaccatc
gtcttctgcgagaccaagagagaggccactgagctctccatgaacacatccatcaaacag
agcgcgcagacgctgcacggagacattcctcagaaacagagagagatcacgctcaaggga
ttcaggagcggcacgtttgaagtgttggtggccactaatgtggcggcccgcggcctggac
atcccagagttggacctggtcattcagtgctctcctccaaacgatgtggaatcatatatc
caccggtctggacggaccggcagagccggaagaacaggcatctgcatctgtttctaccag
cgcaaggaggagagccagctcaagtttgtggagcagaaagcggggatcaccttcaaacgg
gtcggggtcccaacagccaacgacatcatccagtcctccagtaaagatgccgtgaggttt
ctggactcggttccagcggtggcggtggggtatttccgtgaggctgcgcaggaactcatc
gagcagcgcggggcggtggaggctctggcagcggccctcgctcacatatcaggggccacc
agcctggagcagaggtccctcatcaactcagacactgggttcaccaccatgatgatgagc
tgctctcaagaaatgcacaacatcggttacgcctggcgcggcctgaaggagcagctcggg
gaggaagtcgatgagcacatcaaacgcatgaccttcctcaagggcaagaagggtgtgtgt
ttcgacgtcccggccagcaaagcgaaagagatgcaggacagatggcaggacggccgccgc
tggcagctgagcgtggccacagagctccccgagatggagcagagcatgcggccgagcagc
gaacggtcctccggcgggttcggacgaggacgccgctcgtttggcttcaaaggcaataac
agttcgggaggtagaagaggacgaggaggtgctcagaaacgcagcttcagccaggccttc
gattactga
DBGET
integrated database retrieval system
