Serratia rubidaea: AXX16_1280
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Entry
AXX16_1280 CDS
T04417
Name
(GenBank) Formate hydrogenlyase transcriptional activator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
srz
Serratia rubidaea
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srz03000
]
AXX16_1280
Transcription factors [BR:
srz03000
]
Prokaryotic type
Helix-turn-helix
Other families
AXX16_1280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_2
AAA_5
AAA
HTH_30
Mg_chelatase
HTH_psq
HTH_23
HTH_7
HTH_50
AAA_16
HTH_1
HTH_29
Phage_CI_repr
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
AML57001
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Position
complement(1380630..1382396)
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AA seq
588 aa
AA seq
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MQGNSAASDVHANPLLSDSWFRSQLYGLERNADDFPRVRQGELADVLANNAGLQQFAQPV
IRQLAQQMAETQSVVILSDASGLVLNTFGDMQALEKAQRFALAPGNLWSECGRGTNAIGT
ALAIDDGCEIHGRQHFLTHNQGLYCAAMPLQMPNGQVAGVIDVSGPAHFPHPQTFSRVAA
AAKQIEYLWVKQSLHPQQWLLSLHPLQQGIDTSDELLLVFSDNILVAANRLAMRELALSA
DRFASLTFQQLFPQLSQQANTIPAAVDIGTQRYWFRLRAPQRSHFSVPDSAAGDLPCALR
RDGAKMVRLLNAGVSLCIYGETGSGKEYVSRALHQQSRWRTGKFVAINCAAIPEALIESE
LFGYQPGAFTGASKNGYIGKIREADGGVLFLDEIGDMPLALQTRLLRVLQEKEVAPLGSS
RSWPVNFAVICATHRDLTQRVADGEFREDLFYRLQEFALTIPPLRDWPDVAGFIDDVWQE
LGAAQRGVRLSPALLTTLAQQPWPGNVRQLRSLLRVLLALADEGEELSERHLPAEYRHTP
AQPLRERHDERLINETLQRYNGNISKAAQALGVARSTLYRRAARDKGD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaattccgccgcgtctgacgtgcacgccaacccgctgttaagcgactcctgg
tttcgcagccagctgtatgggctggaacgcaacgccgacgatttcccgcgcgtacgtcag
ggcgaactggccgatgtattagccaacaacgccggcctgcaacagtttgcccagccggta
attcgacagctggcgcagcagatggcggagacgcagtcggtggtgattttatccgacgcc
agcgggctggtgcttaatacctttggcgacatgcaggcgctggagaaagcccagcgcttt
gccctggcgcccggaaatctgtggagcgaatgcggacgcggcaccaacgcgattggcacg
gcgctggcgattgacgatggttgcgaaattcacggccgacagcattttctgacgcacaat
cagggcctgtactgcgccgcaatgccgctgcagatgccaaacggccaggttgccggcgtg
attgatgtctccggtccggcgcactttcctcatccgcagaccttcagccgggtagccgcg
gcggcaaaacagattgaatatctctgggttaagcagagcctgcatccacagcagtggctg
ctcagcctgcatccgctgcagcagggcatcgacaccagcgatgagctactgctggtgttc
tctgacaatattctggtggcggccaaccggctggccatgcgcgaactggcgttgagcgcc
gatcgctttgccagcctgacgtttcagcagctgtttccacagctgtcgcagcaggccaac
acgatccccgccgccgtcgacatcggtacgcagcgctactggttccgcctgcgcgcgcca
cagcgcagccacttcagcgtgccggacagtgccgcaggcgatctgccctgcgcgctgcgg
cgtgacggcgcaaaaatggtgcggctgctcaatgccggcgtttcgctgtgcatttacggc
gaaaccggcagcggcaaggagtacgtcagccgcgcgctgcatcagcagagtcgctggcgc
accggcaagtttgtcgccatcaactgtgcggcgatcccggaagcgctgatcgaatccgaa
ctgtttggctaccagcccggcgcgtttaccggcgccagtaaaaacggctacatcggcaaa
attcgtgaggcggatggcggcgtgctgttcctcgatgaaatcggtgatatgccgctggcg
ctgcagacccgtttgctgcgcgtgctgcaggaaaaagaggtggcgccgctcggctccagc
cgcagctggccggttaattttgccgtgatctgcgccacgcaccgcgatctgacgcagcgc
gtggccgacggtgagtttcgtgaagatttgttctatcgcctgcaggagtttgccctgacc
attccgccactacgcgactggccggacgttgcgggctttattgacgatgtgtggcaggag
ctgggcgccgcgcagcgcggcgtccggctgtccccggcgctgctgacgacgctggcgcag
cagccgtggccgggcaacgtgcgccagttacgcagcctgctgcgggtgctgctggcgctg
gccgatgagggcgaagagctgagcgaaagacatttgccggcggagtatcgtcacacgcca
gcgcagccgctgcgcgaacgtcacgatgaacggctgatcaatgaaacgctgcagcgctat
aacggcaatatcagtaaagcggcgcaggcgctgggcgtcgcgcgcagcacgctgtatcgc
cgtgcggcacgcgataagggagattaa
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