Streptococcus salivarius HSISS4: HSISS4_01674
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Entry
HSISS4_01674 CDS
T04634
Symbol
recD
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssah
Streptococcus salivarius HSISS4
Pathway
ssah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HSISS4_01674 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssah03400
]
HSISS4_01674 (recD)
Enzymes [BR:
ssah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HSISS4_01674 (recD)
DNA repair and recombination proteins [BR:
ssah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HSISS4_01674 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
AAA_12
HHH_5
DEAD
PIF1
nSTAND3
UvrD-helicase
UvrD_C
RsgA_GTPase
SLFN-g3_helicase
AAA
AAA_16
AAA_14
T2SSE
AAA_28
AAA_17
NTPase_1
TsaE
HHH
Motif
Other DBs
NCBI-ProteinID:
ALR80686
LinkDB
All DBs
Position
1873885..1876389
Genome browser
AA seq
834 aa
AA seq
DB search
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWG
QLTNHPKYGEQLQMTRYERSKPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKIL
EDPSKLEQISNLSKVNREAFVAKLKINYGTEQILSKLSSYGLTPKAASQIFNQYKEESLN
LIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLESARQIELDPALVAKELTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHL
TRIMKDQPDISAEDKIQASLEEVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTT
VINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNELTQLPSATIHRHLGLNSEDDF
KTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDDLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANTNHIPQMVP
KIVSAAIKSGIAAQDVQILAPMYRGQAGINNLNTIMQDLLNHQEKANQFAFNDIFFRKND
KILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMSFDGNEVIYPRNEWNKITLAY
AMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVRNEG
AKRNTFLIQRFEQTYTQAVDKSVEKIVKNQATGASNQTKTKNNDPSETLENKDFSENINP
SQDLVNTYSQPVDKSVNKPVQTEENYRLTEDNWSTIDPMIGLSEDDIAAFFNNN
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaattttatttttcaggaactatcgaacgcgttattttcgaaaacgctagtaat
ttttttcgtatcctactcttagaaattgacgaaacagacagtgattttgaggactatgaa
atcattgttacaggaaccatgggagatgtcatggaaggtgaagattataccttctggggt
cagttaaccaatcatcccaaatatggtgaacaactccaaatgacacgctacgaacggtca
aaaccttctgccagcggtcttatcaagtatttcgctagcgacaattttaaggggattggt
aagaaaacagctgagcgtattgtcgagatctatggcgaagacccaattgacaagattctc
gaagatcctagcaagttagagcagatttccaacctttcaaaggtaaaccgagaagccttc
gttgcaaagttaaaaatcaactatggaaccgaacaaatcttgtccaaactttccagctat
ggactcacaccaaaagctgcctcacaaattttcaaccaatataaggaagaatcgctcaac
cttatcgaggaacacccttatctcttggtagaggaagttcaaggaatcggatttaaaata
gctgaccaactggccgaacgcctaggaattgctagtgatgctcctgagcgtttacgagct
gccttgattcattgtctgctagaagccagtatggaagaaggcgacacctacatcgaagca
aaagccttgctcgaacgaactatcatccttttggaaagtgctcgccagattgaactggac
cctgccttggtcgctaaggaattaaccaatctcatccaagaggataaggtgcaaaatgta
gagactaaaatctttgataataccctatattttgcggaacaaggcatctatacccaccta
actcgtatcatgaaagaccaacctgacatcagtgctgaggacaaaatccaagcaagtctt
gaagaggtggaagaggagcttggtattacttatgataaggtgcaaaaagatgccattatc
aaagccctacaaagcaaggtcttcatcctaacaggtggtcccggaacagggaaaaccact
gttattaacggcattattaaaacctatgccgaccttcatggtctagatctcaaaaagtct
gatttgcctattattttagcggcgccaacgggacgggctgctcgtcgaatgaacgaactc
acccaactccctagtgccactatccatagacatttgggactcaatagcgaggacgatttc
aagaccttagaggactatctcgattgcgacttgattatcatcgatgagttttctatggtt
gatacttggttggccaatcaactctttgaaagtatctctgattcaacccaagtcatcatt
gtgggtgaccaagaccaactgccttccgtaggtcctggccaggtcttggctgaccttttg
cagattgatgacttgcctaaggtttctctgaccaaaattttcagacaatccgaggactcc
accatcgttaccttagctagccagatgcgacaaggccaactacccgctgatttcacagag
aaaaaggctgaccgctcttactttgaggccaataccaaccatattccacagatggttcct
aaaattgtctctgccgctataaagagtggtattgctgctcaggatgtgcaaattttagcc
cccatgtaccgaggacaggctggtatcaacaatctcaataccattatgcaggacctactt
aatcatcaagaaaaggccaatcagtttgcctttaatgatattttcttccgtaagaacgac
aaaattctccatctggtcaacgataccgaactcaatgtcttcaatggcgacatcggcatc
attactgatctcatccctggtaaatatactgaaagcaagcaggacgaaatttacatgtcc
tttgatggcaatgaggttatctatcctcgtaacgaatggaataagattactctggcctat
gccatgtcaatccacaaatctcaagggagtgagttcccagtcgttatccttcccatcaca
cgacaaagtggacgtatgctacaacgtaacctcatctacaccgctatcacacgtgccaag
agtaagctagtcatgttaggggaaatcgcagcctttgattatgccgttcgcaacgaagga
gctaaacgaaatacttttctcatccaacgttttgaacaaacttatacacaagctgttgat
aagtctgtcgaaaagattgttaaaaaccaggcaacaggcgcctccaatcaaacaaaaacg
aaaaacaacgacccctcagaaacccttgaaaacaaagacttttcggaaaatatcaatcca
tcccaagatcttgttaacacttattcacagcctgtggataagtctgttaacaaacctgtg
caaacagaagaaaactatcgtttaactgaagataattggtcaactatagatccaatgatt
gggctcagtgaagacgatattgctgccttttttaacaacaactaa
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